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Data from: How much information is needed to infer reticulate evolutionary histories?
负责人:
关键词:
reticulate evolution;phylogenetic network;network reconstruction;evolutionary tree
DOI:
doi:10.5061/dryad.f6n8s
摘要:
Phylogenetic networks are a generalization of evolutionary trees and are an important tool for analyzing reticulate evolutionary histories. Recent
Data from: Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus
负责人:
关键词:
DOI:
doi:10.5061/dryad.g4mj2
摘要:
d the anchor hybrid enriched loci to infer lineage divergence parameters using coalescent models of isolation with migration. Results Phylogenetic
Data from: More on the best evolutionary rate for phylogenetic analysis
负责人:
关键词:
Experimental design;phylogenomics
DOI:
doi:10.5061/dryad.s342d
摘要:
t evolve at near-optimal rates (as inferred here) could be used directly to prioritize genes for phylogenetic inference. In combination with measures
Data from: Are flatfishes (Pleuronectiformes) monophyletic?
负责人:
关键词:
Mesozoic;Pleuronectiformes;Model of Evolution;Acanthomorpha;Non-stationary Evolution;phylogeny;Base Composition Heterogeneity;Cenozoic
DOI:
doi:10.5061/dryad.t749b
摘要:
. The polyphyletic nature of the Pleuronectiformes is often inferred to be the result of weak historical signal and/or artifact of phylogenetic inference due to a bias
Data from: Phylogeny, ancestors, and anagenesis in the hominin fossil record
负责人:
关键词:
Hominin
DOI:
doi:10.5061/dryad.6d2h8bp
摘要:
Probabilistic approaches to phylogenetic inference have recently gained traction in paleontological studies. Because they directly model proce
Data from: Multiple refugia and barriers explain the phylogeography of the Valais shrew, Sorex antinorii (Mammalia: Soricomorpha)
负责人:
关键词:
Sorex araneus;refugia within refugia;Niche Modelling;Isolation by resistance;Sorex arunchi;Sorex antinorii;phylogeography;cytochrome b;Pleistocene
DOI:
doi:10.5061/dryad.2jj36325
摘要:
al and landscape genetic approach, and thereby to infer the locations of glacial refugia and establish the influence of geographical barriers. We sequenced par
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
. Phylogenetic profiling is a bioinformatics approach to identify the influence of a trait across species and can be employed to infer the evoluti
Data from: Automated integration of trees and traits: a case study using paired fin loss across teleost fishes
负责人:
关键词:
Phenotype;bioinformatics pipeline;Inference;paired fins;ancestral state reconstruction;evolutionary morphology;Teleostei;Fishes;ontology;missing data
DOI:
doi:10.5061/dryad.v0s27
摘要:
d on ontological inference, as well as phylogenetic propagation, to reduce overall data loss. Using inference enabled by ontology-based annotations, missing data wer
Data from: Genetic diversity is largely unpredictable but scales with museum occurrences in a species-rich clade of Australian lizards
负责人:
关键词:
Ctenotus;genetic diversity;population genetics;Ctenotus skinks;museum data;Lewontin's paradox
DOI:
doi:10.5061/dryad.kk73p
摘要:
history and demography. To better understand the processes that influence levels of genetic diversity across taxa, we collected genome-wide restriction-associated DNA data

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