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Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
- 负责人：
- DOI：
- doi:10.5061/dryad.nc866
- 摘要：
- rely when attempting to model evolution across massive, diverse datasets. However, not all deficiencies of inference models result in unreliable phylogenetic esti
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
- 负责人：
- Cranston, Karen A.
- DOI：
- doi:10.5061/dryad.1611
- 摘要：
- phylogenies in plants. We conclude that there is great potential for phylogenetic inference using data from next-generation sequencing protocols but tha
Data from: Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus
- 负责人：
- 关键词：
- Artocarpus;incomplete lineage sorting;Target Enrichment;phylogenetics;allele phasing;HybSeq;alleles
- DOI：
- doi:10.5061/dryad.r8q72
- 摘要：
- heterozygous sequences do not contribute disproportionately to poor phylogenetic resolution and that the use of allele sequences for phylogeny reconstruction doe
Data from: Genomic repeat abundances contain phylogenetic signal
- 负责人：
- DOI：
- doi:10.5061/dryad.vn0gc
- 摘要：
- on sequence reads, which results in abundance estimates of different classes of genomic repeats. Phylogenetic trees are then inferred based on the genome-wide
Data from: Phylogenetic signal and noise: predicting the power of a data set to resolve phylogeny
- 负责人：
- DOI：
- doi:10.5061/dryad.61cg073t
- 摘要：
- ve phylogenetic research. Here, we derive theory based on the fundamental unit of the phylogenetic tree, the quartet, that applies estimates of the state space
Data from: Death is on our side: paleontological data drastically modify phylogenetic hypotheses
- 负责人：
- DOI：
- doi:10.5061/dryad.mp48001
- 摘要：
- iments on empirical data matrices, we show that the inclusion of paleontological data has a remarkable effect in phylogenetic inference. Fossils often have higher levels
Data from: Reticulate evolution in nuclear Middle America causes discordance in the phylogeny of palm?pitvipers (Viperidae: Bothriechis)
- 负责人：
- DOI：
- doi:10.5061/dryad.7n42q35
- 摘要：
- in Bothriechis and is responsible for historical incongruence in the phylogeny. Inference of the order of events suggests that reticulation in Nuclear
Data from: Spatial phylogenetics reveals evolutionary constraints on the assembly of a large regional flora
- 负责人：
- DOI：
- doi:10.5061/dryad.kf6q10b
- 摘要：
- and use these to infer fine-scale variation in potential diversity, phylogenetic distance, and interspecific range overlaps. We identify 11 bioregions based
Data from: The utility of cranial ontogeny for phylogenetic inference: a case study in crocodylians using geometric morphometrics
- 负责人：
- DOI：
- doi:10.5061/dryad.14fn1
- 摘要：
- trajectories for phylogenetic inference.
Data from: Selecting question-specific genes to reduce incongruence in phylogenomics: a case study of jawed vertebrate backbone phylogeny
- 负责人：
- DOI：
- doi:10.5061/dryad.47v40
- 摘要：
- both concatenation and coalescent-based frameworks. To evaluate the efficiency of extracting phylogenetic signals among different data filtering methods
