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Data from: Mining for single nucleotide polymorphisms and insertions / deletions in expressed sequence tag libraries of oil palm
- 负责人：
- DOI：
- doi:10.5061/dryad.157
- 摘要：
- T (Expressed Sequence Tag) data bases. The development of high-throughput methods for the detection of SNPs (Single Nucleotide Polymorphism) and small indels (inserti
Data from: Benefits and challenges with applying unique molecular identifiers in next generation sequencing to detect low frequency mutations
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.n6068
- 摘要：
- Indexing individual template molecules with a unique identifier (UID) before PCR and deep sequencing is promising for detecting low frequenc
Data from: High-throughput SNP genotyping of historical and modern samples of five bird species via sequence capture of ultraconserved elements
- 负责人：
- DOI：
- doi:10.5061/dryad.2c220
- 摘要：
- samples (23.5×). The number of nucleotide sites with at least 8× sequencing depth was high, with averages ranging from 0.89 × 106 bp (Arachnothera, modern
Data from: Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology
- 负责人：
- 关键词：
- Eurasian perch SNP development and validation de novo assembly next-generation sequencing population genomics DNA pooling
- DOI：
- doi:10.5061/dryad.s2405
- 摘要：
- Massively parallel sequencing a small proportion of the whole genome at high coverage enables answering a wide range of questions from
Data from: Patterns of genome-wide nucleotide diversity in the gynodioecious plant Thymus vulgaris are compatible with recent sweeps of cytoplasmic
- 负责人：
- DOI：
- doi:10.5061/dryad.813mf
- 摘要：
- populations at low frequency via mutation or migration and go to fixation unimpeded (successive sweeps), or CMS genes maintain polymorphism ove
Data from: Reduced representation sequencing detects only subtle regional structure in a heavily exploited and rapidly recolonizing marine mammal
- 负责人：
- Dussex, Nicolas
- 关键词：
- commercial fisheries conservation genotyping-by-sequencing pinnipeds population genetics single nucleotide polymorphisms
- DOI：
- doi:10.5061/dryad.63nm407
- 摘要：
- Next‐generation reduced representation sequencing (RRS) approaches show great potential for resolving the structure of wild populations. Howeve
Data from: Estimating the parameters of background selection and selective sweeps in Drosophila in the presence of gene conversion
- 负责人：
- 关键词：
- sequence diversity;background selection;selective sweeps;gene conversion;drosophila melanogaster
- DOI：
- doi:10.5061/dryad.vs264
- 摘要：
- ween the within-population synonymous nucleotide site diversity (?S) of a gene and its degree of divergence from related species at nonsynonymous nucleotide sites (KA). By usi
Data from: A sequel to Sanger: amplicon sequencing that scales
- 负责人：
- DOI：
- doi:10.5061/dryad.4368h
- 摘要：
- composition and varied sequence attributes. SMRT and Sanger sequences were very similar, but SMRT sequencing provided more complete coverage, es
Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
- 负责人：
- DOI：
- doi:10.5061/dryad.8g470
- 摘要：
- Restriction-enzyme-based sequencing methods enable the genotyping of thousands of single nucleotide polymorphism (SNP) loci in non-model organisms
Data from: Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus.
- 负责人：
- DOI：
- doi:10.5061/dryad.4n9b4
- 摘要：
- ng these negative effects, the nucleotide substitution rate and the spread of transposons is reduced in selfing species. We suggest that differences
