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Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
负责人:
关键词:
Mendelian error;Choloepus hoffmanni;genotyping error;single nucleotide polymorphism;Next Generation Sequencing;ddRAD
DOI:
doi:10.5061/dryad.8g470
摘要:
Restriction-enzyme-based sequencing methods enable the genotyping of thousands of single nucleotide polymorphism (SNP) loci in non-model organisms
Data from: Fast and cost-effective genetic mapping in apple using next-generation sequencing
负责人:
关键词:
Malus x domestica
DOI:
doi:10.5061/dryad.55t54
摘要:
e we use such a method, called genotyping-by-sequencing (GBS), to produce a data set for genetic mapping in an F1 population of apples (Malus x domestica
Data from: Genotyping-by-sequencing for estimating relatedness in non-model organisms: avoiding the trap of precise bias
负责人:
关键词:
pedigree;low coverage;relationships;Next-generation sequencing;population genomics;Balaenoptera musculus;Holocene;double-digest restriction-site associated DNA (ddRAD)
DOI:
doi:10.5061/dryad.t8ph5
摘要:
There has been remarkably little attention to using the high resolution provided by genotyping-by-sequencing (i.e. RADseq and similar methods
Data from: Stepwise Threshold Clustering: a new method for genotyping MHC loci using next-generation sequencing technology
负责人:
关键词:
Major histocompatibility complex;Next-generation sequencing;MHC;pyrosequencing;Gasterosteus aculeatus
DOI:
doi:10.5061/dryad.4fn4g
摘要:
ilar sequence problem, where very similar alleles can be difficult to distinguish as two distinct alleles. Here were present a new method for genotyping MHC loci
Data from: GIbPSs: a toolkit for fast and accurate analyses of genotyping-by-sequencing data without a reference genome
负责人:
关键词:
RAD;paired-end sequencing;bioinformatics;genotyping;GBS
DOI:
doi:10.5061/dryad.q2b49
摘要:
Genotyping-by-sequencing (GBS) and related methods are increasingly used for studies of non-model organisms from population genetic to phyloge
Data from: Rapid and inexpensive whole-genome genotyping-by-sequencing for crossover localization and fine-scale genetic mapping.
负责人:
关键词:
DOI:
doi:10.5061/dryad.vn8km
摘要:
of the DNA helicase gene RECQ4A. In summary, we present a new, cost-efficient method for large-scale, high-precision genotyping-by-sequencing.
Data from: Geographically-stratified HIV-1 group M pol subtype and circulating recombinant form sequences
负责人:
关键词:
HIV-1;GenBank Search;molecular epidemiology;Subtyping;pol Sequences
DOI:
doi:10.5061/dryad.56j2n
摘要:
Accurate classification of HIV-1 group M lineages, henceforth referred to as subtyping, is essential for understanding global HIV-1
Data from: Special features of RAD Sequencing data: implications for genotyping
负责人:
关键词:
Genomics\/Proteomics;Caenorhabditis elegans;Population Ecology;Bioinfomatics\/Phyloinfomatics;Ecological Genetics;Heliconius melpomene
DOI:
doi:10.5061/dryad.218p2
摘要:
RAD Sequencing (RAD-Seq) is an economical and efficient method for SNP discovery and genotyping. As with other sequencing-by-synthesis methods

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