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Data from: Phylogenetic informativeness reconciles ray-finned fish molecular divergence times
- 负责人：
- DOI：
- doi:10.5061/dryad.3rq51
- 摘要：
- ) divergences. By removing data deemed saturated, we reconcile the competing age estimates and highlight that the older mtDNA based ages were driven by nucleotide
Data from: Revised time scales of RNA virus evolution based on spatial information
- 负责人：
- DOI：
- doi:10.5061/dryad.dc770
- 摘要：
- onary biology. Dating the emergence of a pathogen often relies on estimates of evolutionary rates derived from nucleotide sequence data. For many viruses, this ha
Data from: Construction of a virtual Mycobacterium tuberculosis consensus genome and its application to data from a next generation sequencer
- 负责人：
- 关键词：
- phylogenetic analysis;Mycobacterium tuberculosis;consensus sequence;virtual typing;SNP concatemer
- DOI：
- doi:10.5061/dryad.nq070
- 摘要：
- ), and evaluated its feasibility in in sillico epidemiological analyses. Results: The consensus sequence (CS) was successfully constructed and utilized to perform
Data from: Mitochondrial phylogenomics of early land plants: mitigating the effects of saturation, compositional heterogeneity, and codon-usage bias
- 负责人：
- DOI：
- doi:10.5061/dryad.7b470
- 摘要：
- ng-lineage composition, and inferences from degenerated nucleotide data that avoids the effects of synonymous mutations that underlie codon-usage bias, ag
Data from: Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure
- 负责人：
- DOI：
- doi:10.5061/dryad.p34h3
- 摘要：
- ) sequences to characterize repeat structure in the plastome of Monsonia emarginata L'Hér. (Geraniaceae). We used OrgConv and inspected nucleotide alignments
sequencing of reduced representation libraries to discover single nucleotide polymorphisms (SNPs) in Megabunus harvestmen" in Genomic" data-category="" data-cropid="" data-dimen="" data-id="b4333c1d-f979-11ea-ae96-0242ac110002"> Data from: "454 sequencing of reduced representation libraries to discover single nucleotide polymorphisms (SNPs) in Megabunus harvestmen" in Genomic
- 负责人：
- DOI：
- doi:10.5061/dryad.55qb2
- 摘要：
- s been an increasing interest in this order. Here we use next-generation sequencing of reduced representation libraries to establish nuclear DNA markers. To the bes
Data from: Multilocus analysis of nucleotide variation and speciation in three closely related Populus (Salicaceae) species
- 负责人：
- DOI：
- doi:10.5061/dryad.5d2d7
- 摘要：
- n known to trigger species divergence and ultimately speciation. Here, we estimated the nucleotide variation and speciation in three closely related Populus species
Data from: Finding stories in noise: mitochondrial portraits from RAD data
- 负责人：
- DOI：
- doi:10.5061/dryad.75fh336
- 摘要：
- of mitochondrial sequences. Most researchers using this approach appear to be unaware that many Single Nucleotide Polymorphisms (SNPs) identified from genome-wide sequence
Data from: Targeted re-sequencing of five Douglas-fir provenances reveals population structure and putative target genes of positive selection
- 负责人：
- DOI：
- doi:10.5061/dryad.14ns8
- 摘要：
- and sequenced in at least one individual. We found 79,910 single nucleotide polymorphisms (SNPs) whose genotypes were called in all individuals. The data
from genome sequences
- 负责人：
- DOI：
- doi:10.5061/dryad.1qp80
- 摘要：
- and annotated giant panda (Ailuropoda melanoleuca) genome sequences as references. We identified 13.8 million single nucleotide polymorphisms (SNP) in the thr
