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), using coalescent-based methods
- 负责人：
- DOI：
- doi:10.5061/dryad.053m3
- 摘要：
- , species delimitation approaches using multi-species coalescent models with multiple loci are recommended if morphological data are unavailable or unhelpful. Moreove
Data from: Using genomic location and coalescent simulation to investigate gene tree discordance in Medicago L.
- 负责人：
- DOI：
- doi:10.5061/dryad.85c0s
- 摘要：
- . Here, we propose a stepwise method by which these processes can be discerned using information on genomic location coupled with coalescent simulation
Data from: Microevolutionary processes generate phylogenomic discordance at ancient divergences
- 负责人：
- DOI：
- doi:10.5061/dryad.88qf4
- 摘要：
- divergences. I used multispecies coalescent models to determine the impact of stochastic processes on deep phylogenomic histories. Here I show phylogenomic
Data from: Coestimating reticulate phylogenies and gene trees from multilocus sequence data
- 负责人：
- Nakhleh, Luay
- 关键词：
- Multispecies network coalescent reticulation incomplete lineage sorting phylogenetic network Bayesian inference RJMCMC
- DOI：
- doi:10.5061/dryad.3h185
- 摘要：
- The multispecies network coalescent (MSNC) is a stochastic process that captures how gene trees grow within the branches of a phylogenetic network
Data from: Detecting evolutionarily significant units above the species level using the Generalized Mixed Yule Coalescent method
- 负责人：
- DOI：
- doi:10.5061/dryad.3rt26
- 摘要：
- diversity patterns, using the Generalized Mixed Yule Coalescent (GMYC) method to test for the existence of evolutionarily significant units above the species (higher
Data from: The coalescent in boundary-limited range expansions
- 负责人：
- DOI：
- doi:10.5061/dryad.mk6g1
- 摘要：
- , as driven for instance by global warming. Here, we develop a coalescent model to study the genetic impact of such "boundary-limited" range expansion
Data from: Understanding past population dynamics: Bayesian coalescent-based modeling with covariates
- 负责人：
- DOI：
- doi:10.5061/dryad.mj0hn
- 摘要：
- a number of flexible coalescent-based models for Bayesian nonparametric estimation of the effective population size as a function of time. Major goal
Data from: SimPhy: phylogenomic simulation of gene, locus and species trees
- 负责人：
- DOI：
- doi:10.5061/dryad.707td
- 摘要：
- , and show that it scales extremely well with complex models and/or large trees, being an order of magnitude faster than the most similar program (DLCoal-Sim
Data from: Origin of a cryptic lineage in a threatened reptile through isolation and historical hybridization
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.nt65q
- 摘要：
- Rattlesnake (Sistrurus catenatus). We then use coalescent-based modeling techniques to identify the evolutionary mechanisms responsible for the origin
Data from: Assignment of homoeologues to parental genomes in allopolyploids for species tree inference, with an example from Fumaria (Papaveraceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.7625d
- 摘要：
- , such as substitution model error (failure of the model to account for the complexity of the data) and coalescent stochasticity (presence
