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Data from: Robust design for coalescent model inference
- 负责人:
- DOI:
- doi:10.5061/dryad.n7rm21c
- 摘要:
- the skyline demographic coalescent model, spatio-temporal sampling under the structured coalescent model, and time discretization for sequentially Markovian
Data from: A multispecies coalescent model for quantitative traits
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.m2s1735
- 摘要:
- We present a multispecies coalescent model for quantitative traits that allows for evolutionary inferences at micro- and macroevolutionary scales
Data from: Model-based species delimitation: are coalescent species reproductively isolated?
- 负责人:
- DOI:
- doi:10.5061/dryad.fk869rf
- 摘要:
- statistical models rooted in the multispecies coalescent process. Specifically, these models allow for simultaneous estimation of the number of species present
Data from: Coalescent versus concatenation methods and the placement of Amborella as sister to water lilies
- 负责人:
- DOI:
- doi:10.5061/dryad.qb251
- 摘要:
- nucleotide sites corroborate results from coalescent analyses, while fast-evolving sites place Amborella alone as the first lineage of extant angiosperms
Data from: PHRAPL: phylogeographic inference using approximate likelihoods
- 负责人:
- DOI:
- doi:10.5061/dryad.1414v
- 摘要:
- le model parameters include coalescence time among populations or species, gene flow, and population size. We describe the method and test its performance
Data from: Considering gene flow when using coalescent methods to delimit lineages of North American pitvipers of the genus Agkistrodon
- 负责人:
- DOI:
- doi:10.5061/dryad.v2n38
- 摘要:
- Examining species diversity and mechanisms of speciation using coalescent models provides a framework for how regional diversity is accrued, eve
Data from: Species delimitation with gene flow
- 负责人:
- DOI:
- doi:10.5061/dryad.t8016
- 摘要:
- to identify evolutionarily independent lineages (i.e., to delimit species) using genetic data have typically adopted multispecies coalescent approaches tha
Data from: Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
- 负责人:
- DOI:
- doi:10.5061/dryad.8tm76
- 摘要:
- Marginal likelihood estimates to compare models using Bayes factors frequently accompany Bayesian phylogenetic inference. Approaches to es
Data from: Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
- 负责人:
- DOI:
- doi:10.5061/dryad.3629v
- 摘要:
- and taxa, which produced strongly conflicting topologies. In contrast, the coalescent methods, which accommodate gene tree heterogeneity, yield a phylogeny
Data from: HyDe: a Python package for genome-scale hybridization detection
- 负责人:
- DOI:
- doi:10.5061/dryad.372sq
- 摘要:
- we introduce HyDe, a software package for detecting hybridization using phylogenetic invariants arising under the coalescent model with hybridization. HyDe