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Data from: Unraveling historical introgression and resolving phylogenetic discord within Catostomus (Osteichthys: Catostomidae)
负责人:
关键词:
Catostomus;Patterson\u2019s D-statistic;ddRAD;Phylogenetic Incongruence;hybridization;introgression;Catostomus spp.
DOI:
doi:10.5061/dryad.8f1j5nd
摘要:
multispecies coalescent and concatenated approaches. Patterson's D-statistic was applied to resolve potential discord, examine introgression, and test the putati
Data from: Exploring tree-like and non-tree-like patterns using genome sequences: an example using the inbreeding plant species Arabidopsis thal
负责人:
关键词:
Arabidopsis thaliana;species concept;TICR;quartet;gene tree discordance;concordance;Arabidopsis lyrata
DOI:
doi:10.5061/dryad.q044d
摘要:
n that the assumptions of the multispecies coalescent model hold. Therefore, we implemented a new, nonparametric test to evaluate whether a populati
Data from: Addressing incomplete lineage sorting and paralogy in the inference of uncertain salmonid phylogenetic relationships
负责人:
关键词:
Coregonus;Gene Tree and Species Tree Conflict;incomplete lineage sorting;Parahucho;salmonidae;Segmental Polyploidy;phylogeny
DOI:
doi:10.25338/B8DC81
摘要:
ate the effects of gene tree conflict based on aspects of salmonid genome history and the multispecies coalescent. We investigate in detail three unce
Data from: Dense geographic and genomic sampling reveals paraphyly and a cryptic lineage in a classic sibling species complex
负责人:
关键词:
Empidonax difficilis \/ occidentalis \/ flavescens \/ flaviventris;ultraconserved elements;RADseq;Tyrannidae;phylogenomics
DOI:
doi:10.5061/dryad.nj16d88
摘要:
cs, and species delimitation. Despite the power of using genome-wide genetic markers in systematics and related fields, approaches such as the multispecies coalescent remain
Data from: The molecular biogeography of the Indo-Pacific: testing hypotheses with multispecies genetic patterns
负责人:
关键词:
Biogeographic Realms;Dispersal;discordance;analysis of molecular variance;comparative phylogeography;Distance Based Redundancy Analysis;Biogeographic Provinces
DOI:
doi:10.5061/dryad.30326v6
摘要:
of outcomes, although the majority of species fit a few broad biogeographic regions. Repeated coalescent simulation of a simple vicariance model yielded a wide
Data from: Reticulate evolutionary history and extensive introgression in mosquito species revealed by phylogenetic network analysis
负责人:
关键词:
Bioinfomatics/Phyloinfomatics Genomics/Proteomics Hybridization Insects Molecular Evolution Phylogenetic Theory and Methods
DOI:
doi:10.5061/dryad.tn47c
摘要:
ng a recently devised framework that combines the multispecies coalescent with phylogenetic networks. This framework allows us to capture ILS
Data from: Towards a self-updating platform for estimating rates of speciation and migration, ages, and relationships of taxa
负责人:
关键词:
Primates;tree calibration;Bayesian phylogenetics;multilocus multispecies coalescent;Next-generation sequencing;data mining;Primates;Arecaceae;palms;divide-and-conquer methods;GenBank
DOI:
doi:10.5061/dryad.sk81k
摘要:
of Speciation and Migration, Ages, and Relationships of Taxa), and provide a proof of concept for dealing with the moving targets of evoluti
ons of ecological specialization for pre-Quaternary diversification
负责人:
关键词:
Neogene;Quaternary;Biogeography;Vaejovidae;stenotopy;Pseudouroctonus;North America;Pliocene;phylogeography;speciation;diversification;Miocene;Pleistocene
DOI:
doi:10.5061/dryad.q58r0
摘要:
s and a general mixed Yule coalescent model to identify independent geographical clusters. A time-calibrated multilocus species tree was reconstructed usi
Data from: Multilocus genetic diversity and historical biogeography of the endemic wall lizard from Ibiza and Formentera, Podarcis pityusensis
负责人:
关键词:
conservation genetics;Reptiles;Podarcis pityusensis;phylogeography;molecular evolution
DOI:
doi:10.5061/dryad.r1538
摘要:
for the principal mitochondrial lineages within the Balearics, using the multispecies coalescent model, and provided statistical support for divergence

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