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Data from: Assessing the impacts of positive selection on coalescent-based species tree estimation and species delimitation.
负责人:
关键词:
multispecies coalescent model;neutral theory;systematics;population genetics;phylogenetics;Coalescent Theory;Adaptation
DOI:
doi:10.5061/dryad.5v3b5
摘要:
The assumption of strictly neutral evolution is fundamental to the multispecies coalescent model and permits the derivation of gene
Data from: Model-based species delimitation: are coalescent species reproductively isolated?
负责人:
关键词:
Multispecies coalescent;BPP;Drosophila<\/i> speciation;Genetic distance
DOI:
doi:10.5061/dryad.fk869rf
摘要:
cated statistical models rooted in the multispecies coalescent process. Specifically, these models allow for simultaneous estimation of the number of species present
Data from: Posterior predictive checks of coalescent models: P2C2M, an R package
负责人:
关键词:
Multispecies coalescent;phylogeography;species trees;posterior predictive simulation
DOI:
doi:10.5061/dryad.n715n
摘要:
collected from Tamias and Myotis are not a good fit to the multispecies coalescent model. Taken as a whole, our findings argue that an assessment of the fit
Data from: A multispecies coalescent model for quantitative traits
负责人:
关键词:
DOI:
doi:10.5061/dryad.m2s1735
摘要:
We present a multispecies coalescent model for quantitative traits that allows for evolutionary inferences at micro- and macroevolutionary scales
Data from: Computational performance and statistical accuracy of *BEAST and comparisons with other methods
负责人:
关键词:
Concatenation;Bayesian phylogenetics;Gene tree;Primates;Species tree;Pedicularis;Multispecies coalescent;Supermatrix;phylogenomics
DOI:
doi:10.5061/dryad.02tf9
摘要:
Under the multispecies coalescent model of molecular evolution, gene trees have independent evolutionary histories within a shared species
Data from: The multispecies coalescent model outperforms concatenation across diverse phylogenomic
负责人:
关键词:
Bayesian model validation;coalescent prior;congruent gene trees;independent prior;Bayes factor;Athens;posterior predictive simulation;Metazoa
DOI:
doi:10.5061/dryad.7q6q3s0
摘要:
on, and multispecies coalescent (MSC) models across 47 phylogenomic data sets collected across tree of life. Tests for substitution models and the concatenation assumpti
Data from: Comparison of methods for molecular species delimitation across a range of speciation scenarios
负责人:
关键词:
molecular species delimitation;Multispecies coalescent;Bayesian phylogenetics;Simulation;generalized mixed Yule-coalescent;Poisson tree processes;speciation
DOI:
doi:10.5061/dryad.739bs
摘要:
e designed for the analysis of single-locus data but are often applied to concatenations of multilocus data. In contrast, the Bayesian multispecies coalescent approa
Data from: Probabilistic species tree distances: implementing the multispecies coalescent to compare species trees within the same model-based
负责人:
关键词:
Multispecies coalescent;Species tree;model comparison;Information theory;phylogenetic distances;phylogenetic networks
DOI:
doi:10.5061/dryad.rh4172f
摘要:
. Multispecies coalescent models (MSC) parameterize the discrete probability distribution of gene trees conditioned upon a species tree with a particular topology and set
Data from: Species delimitation with gene flow
负责人:
关键词:
Scincella;Multispecies coalescent;Sarracenia;approximate likelihoods;isolation-with-migration;Homo Sapiens;genealogical divergence index;coalescent simulations
DOI:
doi:10.5061/dryad.t8016
摘要:
to identify evolutionarily independent lineages (i.e., to delimit species) using genetic data have typically adopted multispecies coalescent approaches tha
Data from: Does gene tree discordance explain the mismatch between macroevolutionary models and empirical patterns of tree shape and branching times?
负责人:
关键词:
Multispecies coalescent;phylogeny;birth-death process;Genealogy
DOI:
doi:10.5061/dryad.8f97r
摘要:
between gene trees and species trees under a combined birth–death and multispecies coalescent model can explain the difference in empirical trees

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