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Data from: SimPhy: phylogenomic simulation of gene, locus and species trees
- 负责人：
- DOI：
- doi:10.5061/dryad.707td
- 摘要：
- -specific, locus-specific), that can be fixed or be sampled from a priori statistical distributions. SimPhy also incorporates comprehensive models
Data from: The spectre of too many species
- 负责人：
- DOI：
- doi:10.5061/dryad.t66gq81
- 摘要：
- s and provide the mathematical justifications. We point out that the distinction between population and species splits made in the protracted speciation model ha
Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.65tn4
- 摘要：
- clades. We find that although true coalescence times are more ancient than speciation times under the multispecies coalescent model, estimated coalescence
Data from: Sex-biased dispersal obscures species boundaries in integrative species delimitation approaches
- 负责人：
- DOI：
- doi:10.5061/dryad.g97d432
- 摘要：
- , statistical parsimony, trinomial distribution of triplets model [tr2]) and validation (STACEY, iBPP) approaches to species delimitation in the sc
Data from: Multilocus species delimitation in a complex of morphologically conserved trapdoor spiders (Mygalomorphae, Antrodiaetidae, Aliatypus)
- 负责人：
- DOI：
- doi:10.5061/dryad.68s40
- 摘要：
- locus discovery and validation approaches (plus a chimeric approach). Additionally, we introduce a novel tree-based discovery approach using species trees. Result
Data from: Phylogeny and biogeography of the Amazonian Pachyptera (Bignonieae, Bignoniaceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.p8cz8w9kq
- 摘要：
- rphology. Morphological data supported the recognition of four of the five potential species suggested by GMYC, all of which were also supported by a multispecies coalescent
Data from: The identification of the closest living relative(s) of tetrapods: phylogenomic lessons for resolving short ancient internodes
- 负责人：
- DOI：
- doi:10.5061/dryad.gd74v
- 摘要：
- . The multispecies coalescent method reconstructed strongly supported topologies that were congruent with concatenation, despite pervasive gene tree heterogeneity. We rejec
Data from: Phylogenetics support an ancient common origin of two scientific icons: Devils Hole and Devils Hole pupfish
- 负责人：
- DOI：
- doi:10.5061/dryad.2bm21
- 摘要：
- genomic subsets and evaluated four historical scenarios using the multispecies coalescent. Our results provide substantial information regardin
Data from: Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
- 负责人：
- DOI：
- doi:10.5061/dryad.3t423
- 摘要：
- . Species delimitation methods based on multispecies coalescent model were employed on DNA sequences from four loci, i.e., ID region of rDNA (ITS + LSU), caM, benA and R
Data from: Polyphasic data support the splitting of Aspergillus candidus into two species; proposal of Aspergillus dobrogensis sp. nov.
- 负责人：
- DOI：
- doi:10.5061/dryad.pg143
- 摘要：
- . Classical phylogenetic methods (maximum likelihood, Bayesian inference) and species delimitation methods based on the multispecies coalescent model supported
