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Data from: Male offspring production by asexual Potamopyrgus antipodarum, a New Zealand snail
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关键词:
Potamopyrgus antipodarum
DOI:
doi:10.5061/dryad.q41jr576
摘要:
lineages had produced males, demonstrating that asexual P. antipodarum can make sons. We used maximum-likelihood analysis of a model of male producti
Data from: Information criteria for comparing partition schemes
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关键词:
partition scheme comparison;model comparison;information criteria;multilocus analysis;AIC;AICP;BICP;BIC;phylogenomics
DOI:
doi:10.5061/dryad.qq586
摘要:
the maximum log-likelihood value with a penalty that depends on the number of parameters being estimated. For the purpose of selecting an optimal partiti
Data from: Displayed trees do not determine distinguishability under the network multispecies coalescent
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关键词:
Species tree;Gene tree;maximum likelihood;identifiability;phylogeny;rooted triple;hybridization;quartet
DOI:
doi:10.5061/dryad.t2d38
摘要:
ween species. Probabilistic models using the multispecies coalescent can be used in this framework for likelihood-based inference of both network topologies
Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
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关键词:
admixture;Population Divergence;transcriptome;maximum likelihood;Biorhiza pallida;statistical phylogeography;Belizinella gibbera;Pleistocene
DOI:
doi:10.5061/dryad.r3r60
摘要:
calculation provides a powerful framework for estimating recent population history that can be applied to any organism without the need for prior genetic resources.
Data from: Bayesian estimation of the global biogeographical history of the Solanaceae
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关键词:
BioGeoBEARS;Eocene to Holocene;historical biogeography;Biogeographical Stochastic Mapping (BSM);directionality;Dispersal;Solanaceae
DOI:
doi:10.5061/dryad.6gd57
摘要:
Its worldwide distribution suggests multiple long-distance dispersals within and between the New and Old Worlds. Here, we apply maximum likelihood (ML) method
Data from: Accurate estimation of substitution rates with neighbour-dependent models in a phylogenetic context
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关键词:
neighbour-dependent substitution;CpG hypermutability;CpG islands;maximum likelihood phylogeny
DOI:
doi:10.5061/dryad.5vp21b10
摘要:
ng distinct nucleotide sites are stochastically independent. This assumption ensures both mathematical and computational tractability, but is in disagreement
Data from: Inflation of molecular clock rates and dates: molecular phylogenetics, biogeography, and diversification of a global cicada radiation from
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关键词:
relaxed clock calibration maximum-likelihood branch lengths gamma distribution aridification climate change
DOI:
doi:10.5061/dryad.5590q
摘要:
rates and maximum-likelihood branch lengths become inflated relative to EF-1α intron and exon rates and branch lengths as clade age increases. We present
Data from: Genetic constraints underlying human reproductive timing in a premodern Swiss village
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关键词:
reproductive scheduling natural selection genetic correlation humans menopause Life-History Evolution
DOI:
doi:10.5061/dryad.3d2m3
摘要:
c variance–covariance matrix was estimated using a restricted maximum-likelihood animal model. We found strong selection for both an early AFR and a late ALR, which resulte
Data from: Multi-locus phylogeny of the Afrotropical freshwater crab fauna reveals historical drainage connectivity and transoceanic dispersal sinc
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关键词:
Eocene divergence;Potamonautidae;zoogeographic;Afrotropical;paleodrainage
DOI:
doi:10.5061/dryad.85569
摘要:
is among freshwater crabs. Phylogenetic analyses of the total evidence data using maximum-likelihood (ML), maximum parsimony (MP), and Bayes
Data from: The Phylogenetic Position of the Musky Rat-Kangaroo and the Evolution of Bipedal Hopping in Kangaroos (Macropodidae: Diprotodontia)
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关键词:
bipedal hopping;ribosomal RNA;Macropodidae;kangaroo;Hypsiprymnodon
DOI:
doi:10.5061/dryad.104
摘要:
on, maximum likelihood, and quartet puzzling all support the hypothesis that macropodines and potoroines are united to the exclusion of Hypsiprymnodon. This hypothes

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