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Data from: Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model
- 负责人：
- DOI：
- doi:10.5061/dryad.h8r2629
- 摘要：
- studies have suggested that analyses of morphological character data using the Bayesian and Maximum likelihood Mk model provide phylogenies of higher
Data from: c-Myc gene sequences and the phylogeny of bats and other eutherian mammals
- 负责人：
- DOI：
- doi:10.5061/dryad.590
- 摘要：
- , and maximum likelihood approaches were adopted, with the most sophisticated involving the separate, then combined, likelihood analyses of the third codon positi
Data from: Analysis of a rapid evolutionary radiation using ultraconserved elements (UCEs): Evidence for a bias in some multi-species coales
- 负责人：
- DOI：
- doi:10.5061/dryad.p1m52
- 摘要：
- ee mitochondrial gene regions). Species tree methods exhibited troubling behavior. Two methods [Maximum Pseudolikelihood for Estimating Species Trees (MP-EST
Data from: Dealing with uncertainty in landscape genetic resistance models: a case of three co-occurring marsupials
- 负责人：
- DOI：
- doi:10.5061/dryad.7cs0p
- 摘要：
- breviceps, and Petaurus norfolcensis) and one ground-dwelling Antechinus (Antechinus flavipes). First, we use maximum-likelihood and a bootstrap procedure
Data from: Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.gv1q5
- 摘要：
- -heterogeneous mixture models have been developed to address this problem in both Bayesian and maximum likelihood (ML) frameworks, their formidable
Data from: Comparing cal3 and other a posteriori time-scaling approaches in a case study with the pterocephaliid trilobites
- 负责人：
- DOI：
- doi:10.5061/dryad.292dd
- 摘要：
- s) and maximum-likelihood parameter estimates. Ancestral taxon inference in cal3 corroborates previously hypothesized ancestor–descendant sequences, but cal3
Data from: A simulation-based approach to statistical alignment
- 负责人：
- DOI：
- doi:10.5061/dryad.p069231
- 摘要：
- on. Finally, it allows computing the maximum-likelihood alignment, the probability of a given pair of sequences integrated over all possible ali
Data from: Phylogenetic ANCOVA: estimating changes in evolutionary rates as well as relationships between traits
- 负责人：
- DOI：
- doi:10.5061/dryad.2r504
- 摘要：
- el the impact of a key innovation, colonization of a new habitat, or environmental change. The approach is optimized with maximum likelihood and is formulated
Data from: Likelihood inference of non-constant diversification rates with incomplete taxon sampling
- 负责人：
- DOI：
- doi:10.5061/dryad.rd2s3
- 摘要：
- and the estimates are unbiased for large trees but are biased for small trees (fewer than 50 taxa). Furthermore, model selection by mea
and Likelihood
- 负责人：
- DOI：
- doi:10.5061/dryad.782
- 摘要：
- cytochrome b (cyt b) gene. Phylogenetic analyses under both parsimony and likelihood frameworks produced the same topologies, but estimates of nodal support wer
