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Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
- 负责人:
- DOI:
- doi:10.5061/dryad.65tn4
- 摘要:
- ng maximum likelihood (ML) and Bayesian approaches. Among the methods examined, we found that topology-based methods often performed better using ML gene trees and method
Data from: An evaluation of a novel estimator of linkage disequilibrium
- 负责人:
- 关键词:
- linkage disequilibrium tetra-choric correlation frequency-dependence Holstein-Friesian HapMap coalescent
- DOI:
- doi:10.5061/dryad.t9f2g
- 摘要:
- a new estimator of a LD parameter (ρ^2) that is much easier to compute than a maximum likelihood (or Bayesian) estimate of a tetra-choric correlati
Data from: Time-dependent speciation and extinction from phylogenies: a least squares approach
- 负责人:
- DOI:
- doi:10.5061/dryad.7891
- 摘要:
- on previous published works, I derive maximum likelihood estimators. Some limitations of the likelihood approach are described, and a fitting procedure based
Data from: A likelihood-based comparison of population histories in a parasitoid guild
- 负责人:
- DOI:
- doi:10.5061/dryad.0g0fs
- 摘要:
- galls. We develop a likelihood method to numerically estimate models of divergence between three populations from multilocus data. We investi
Data from: Estimating genotyping errors from genotype and reconstructed pedigree data
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.vv0gg
- 摘要:
- le from natural populations in the wild. 3. I proposed a maximum likelihood method to reconstruct pedigrees from genotype data with errors occurring
Data from: Local molecular clocks in three nuclear genes: divergence times for rodents and other mammals and incompatibility among fossil calibrations.
- 负责人:
- DOI:
- doi:10.5061/dryad.8502
- 摘要:
- ents. Using seven independent calibration points and a maximum-likelihood framework, we evaluated whether molecular and paleontological estimates of mammali
Data from: Object recognition and localization from 3D point clouds by maximum-likelihood estimation
- 负责人:
- DOI:
- doi:10.5061/dryad.37k3n
- 摘要:
- We present an algorithm based on maximum-likelihood analysis for the automated recognition of objects, and estimation of their pose, from
Data from: A general model for estimating macroevolutionary landscapes
- 负责人:
- DOI:
- doi:10.5061/dryad.28g37
- 摘要:
- of parameter inference. We provide R code to fit the model to empirical data using either maximum-likelihood or Bayesian estimation, and illustrate the use of this cod
Data from: Crayfish molecular systematics: using a combination of procedures to estimate phylogeny
- 负责人:
- DOI:
- doi:10.5061/dryad.716
- 摘要:
- of phylogenetic relationships using maximum-parsimony, maximum-likelihood, and neighbor-joining methods. The estimated trees were used to examine systematic hypotheses relati
Data from: Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes
- 负责人:
- DOI:
- doi:10.5061/dryad.rb5nc
- 摘要:
- with ?100% coverage (?0% missing data) for 31 major lineages. We estimate phylogenies using neighbor joining, maximum parsimony, maximum likelihood, and thr