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Data from: A Bayesian method for analyzing lateral gene transfer
负责人:
关键词:
Phylogenetics Lateral gene transfer Horizontal gene transfer Gene duplication Gene loss Phylogenomics MCMC Bayesian Reconciliation
DOI:
doi:10.5061/dryad.f78r2
摘要:
limited by a lack of computational tools. The best currently available LGT algorithms are parsimony-based phylogenetic methods, which require a pre-computed
Data from: Machine learning biogeographic processes from biotic patterns: a new trait-dependent dispersal and diversification model with model choic
负责人:
关键词:
Biogeography;Macroevolution;model choice;phylogenetics;Machine Learning;island radiation;taxon cycle
DOI:
doi:10.5061/dryad.4cj58
摘要:
method of inference under our model using discriminant analysis of principal components of summary statistics calculated on phyloge
Data from: Developmental plasticity, morphological variation and evolvability: a multilevel analysis of morphometric integration in the shape
负责人:
关键词:
compound leaf;fluctuating asymmetry;leaf shape;Rosaceae;Potentilla;Plasticity;Phylogenetic uncertainty;Procrustes fit;Allometry;Geometric morphometrics;principal component analysis
DOI:
doi:10.5061/dryad.46q6j468
摘要:
er there is a phylogenetic signal in the data on leaf shape. For variation among taxa, variation within taxa, as well as fluctuating asymmetry, ther
phylogenetic analyses of multilocus sequence data
负责人:
关键词:
Phylogenetic Theory and Methods;insects;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.8646
摘要:
phylogenetic analysis using a selected model. The best-fit models were found to differ depending on the data set. Furthermore, differences in the information criteria amo
Data from: Estimating diversification rates on incompletely-sampled phylogenies: theoretical concerns and practical solutions
负责人:
关键词:
incomplete sampling;rate shifts;stochastic polytomy resolution;rate heterogeneity;Phylogenetic uncertainty;birth-death process;diversification
DOI:
doi:10.5061/dryad.53q65vf
摘要:
that incomplete sampling can lead to biased rate estimates, but the statistical properties of methods for accommodating incomplete sampling remain po
Data from: Sweepstake evolution revealed by population-genetic analysis of copy-number alterations in single genomes of breast cancer
负责人:
关键词:
molecular evolution;Single-cell sequencing;Coalescent Theory;bioinformatics;Cancer genomics;Copy-number alteration
DOI:
doi:10.5061/dryad.71jp0
摘要:
. Phylogenetic tree analysis revealed genetically distinct populations, each consisting of homogeneous cells. Bioinformatics methods based on population genetics should be furt
Data from: Gene flow and species delimitation in fishes of Western North America: Flannelmouth (Catostomus latipinnis) and Bluehead sucker
负责人:
关键词:
DOI:
doi:10.5061/dryad.rxwdbrv5f
摘要:
ng life history data. Three phylogenetic methods and a Bayesian assignment test highlighted similar phylogenomic patterns in each, but with considerable difference
Data from: Modular tagging of amplicons using a single PCR for high-throughput sequencing
负责人:
关键词:
DNA Barcoding;systematics;Phylogenetic Theory and Methods;insects
DOI:
doi:10.5061/dryad.22412
摘要:
High-throughput sequencing (HTS) of PCR amplicons is becoming the method of choice to sequence one or several targeted loci for phylogenetic
Data from: Spotted stream frog diversification at the Australasian faunal zone interface, mainland versus island comparisons, and a test
负责人:
关键词:
Hylarana picturata;clines;Colonization;Hylarana;Dispersal;Hylarana signata;Ranidae;Hylarana similis;island amphibians
DOI:
doi:10.5061/dryad.466mn
摘要:
the geographic distribution of genetic variation. Phylogenetic relationships and ancestral biogeographic ranges were estimated using Bayesian and likelihood methods. Finally

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