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Data from: Statistical evidence for common ancestry: application to primates
负责人:
关键词:
Morphological Evolution;molecular evolution;phylogenetics;paleobiology
DOI:
doi:10.5061/dryad.158m0
摘要:
al tests based on morphological, molecular, and biogeographic data and developed two new methods: one that tests for phylogenetic autocorrelation while correcti
Data from: Predicting the ancestral character changes in a tree is typically easier than predicting the root state
负责人:
关键词:
Ancestral state prediction;phylogenetic tree;character evolution;Markov model
DOI:
doi:10.5061/dryad.sc724
摘要:
Predicting the ancestral sequences of a group of homologous sequences related by a phylogenetic tree has been the subject of many studies
Data from: Detection and polarization of introgression in a five-taxon phylogeny
负责人:
关键词:
incomplete lineage sorting;ABBA-BABA;genomics;phylogenetics;hybridization;D-statistics;introgression;phylogenomics
DOI:
doi:10.5061/dryad.4h462
摘要:
in the presence of ILS for a four-taxon clade. However, no integrated method exists to detect introgression using allelic patterns for more complex phylogenies. Her
Data from: Evolution of cultural traits occurs at similar relative rates in different world regions
负责人:
关键词:
cultural phylogenetics;phylogenetic comparative methods;cultural evolution;Social evolution
DOI:
doi:10.5061/dryad.pv84f
摘要:
inhabiting these regions. We used phylogenetic comparative methods and systematic cross-cultural data to assess how different socio-cultural traits change
Data from: Construction of a virtual Mycobacterium tuberculosis consensus genome and its application to data from a next generation sequencer
负责人:
关键词:
phylogenetic analysis;Mycobacterium tuberculosis;consensus sequence;virtual typing;SNP concatemer
DOI:
doi:10.5061/dryad.nq070
摘要:
phylogenetic analysis, evaluation of read mapping efficacy, which is crucial for detecting single nucleotide polymorphisms (SNPs), and various MTBC typing methods
Data from: Using genomic location and coalescent simulation to investigate gene tree discordance in Medicago L.
负责人:
关键词:
Species tree;incomplete lineage sorting;Gene tree;paralogy;Phylogenetic Incongruence;coalescent simulation;hybridization;principal tree;genomic location
DOI:
doi:10.5061/dryad.85c0s
摘要:
ous comparisons. We apply our method to an empirical set of 12 genes from 7 species sampled in the plant genus Medicago that display phylogenetic discordance
Data from: An ancient origin for the enigmatic Flat-Headed Frogs (Bombinatoridae: Barbourula) from the islands of Southeast Asia
负责人:
关键词:
Anura;Bombinatoridae;phylogenetics;Biogeography;Amphibia;Barbourula;Cenozoic;divergence time estimation
DOI:
doi:10.5061/dryad.1914
摘要:
and nuclear genetic data, multiple fossil calibration points, and likelihood and Bayesian methods, we estimate phylogenetic relationships and divergence ti
Data from: Phylogenetic evidence for a shift in the mode of mammalian body size evolution at the Cretaceous-Paleogene boundary
负责人:
关键词:
Brownian motion;Mammaliaformes;Macroevolution;Mesozoic;Ornstein-Uhlenbeck;Mammalia;evolutionary rates;Body Size;Mammals;Cenozoic;Comparative Methods;fossils
DOI:
doi:10.5061/dryad.1n14c
摘要:
1. Phylogenetic comparative methods provide a powerful way of addressing classic questions about tempo and mode of phenotypic evolution in the fossil record, such as whether mammals
Data from: HyDe: a Python package for genome-scale hybridization detection
负责人:
关键词:
gene flow;Coalescence;ABBA-BABA;hybridization;phylogenetic invariants
DOI:
doi:10.5061/dryad.372sq
摘要:
e predicted to occur in equal frequency (i.e., their difference is 0), producing a set of functions called textit{phylogenetic invariants}. In this paper
Data from: Spatially explicit models of dynamic histories: examination of the genetic consequences of Pleistocene glaciation and recent
负责人:
关键词:
Phylogenetic Theory and Methods;Ochotona priniceps;phylogeography;Population Genetics - Theoretical;Holocene;population dynamics;Population Genetics - Empirical;Pleistocene
DOI:
doi:10.5061/dryad.6pq7jg8p
摘要:
of North America are used to provide insights into key questions about integrative approaches in landscape genetics, population genetics and phylogeography

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