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Data from: The evolution of energetic scaling across the vertebrate tree of life
负责人:
Uyeda, Josef Christensen
关键词:
Allometry Energetics Macroecology Macroevolution Phylogenetics: comparative Phylogenetics: methods Physiology: comparative Vertebrates
DOI:
doi:10.5061/dryad.3c6d2
摘要:
l phylogenetic comparative method to investigate how often and in which clades the macroevolutionary dynamics of the metabolic scaling have changed. We find strong evidence tha
Data from: Patterns of cranial shape diversification during the phylogenetic branching process of New World monkeys (Primates: Platyrrhini)
负责人:
关键词:
Ecological axes;molecular phylogeny;Body Size;Comparative studies;semilandmarks;Cacajao calvus;Morphometrics;natural selection
DOI:
doi:10.5061/dryad.n626b
摘要:
gate this diversification, we used geometric morphometric techniques, a molecular phylogenetic tree, ecological data and phylogenetic comparative methods
Data from: Rethinking phylogenetic comparative methods
负责人:
关键词:
Macroevolution;Phylogenetic Natural History;Causality;Graphical Models
DOI:
doi:10.5061/dryad.p8066hd
摘要:
, phylogenetic comparative methods (PCMs) have been framed as a solution to this problem. In this paper, we argue that this way of thinking about PCMs is deeply misleading
Data from: Detecting mosaic patterns in macroevolutionary disparity
负责人:
关键词:
Macroevolution;Phylogenetics: comparative;Phylogenetics: theory;Paleontology;Phylogenetics: methods
DOI:
doi:10.5061/dryad.cd56364
摘要:
phylogenetic comparative methods are often used to reconstruct complex evolutionary dynamics, they are typically limited to a single phenotypic trait. Extensions that accommod
Data from: How well can we detect lineage-specific diversification-rate shifts? A simulation study of sequential AIC methods
负责人:
关键词:
extinction;lineage-specific diversification rates;Akaike information criterion;phylogenetic model selection;speciation
DOI:
doi:10.5061/dryad.261v1
摘要:
s motivated the development of statistical methods for detecting shifts in the rate of lineage diversification across the branches of phylogenic trees. One
Data from: Inference of adaptive shifts for multivariate correlated traits
负责人:
关键词:
Change-point detection;adaptive evolution;Ornstein-Uhlenbeck;PhylogeneticEM;model selection;phylogeny
DOI:
doi:10.5061/dryad.60t0f
摘要:
on on the tree. The method, freely available as an R-package (PhylogeneticEM) is fast, and can deal with missing values. We demonstrate its efficiency and accuracy
Data from: Tree imbalance causes a bias in phylogenetic estimation of evolutionary timescales using heterochronous sequences
负责人:
关键词:
Phylogenetic Theory and Methods;Evolutionary Theory;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.q4545
摘要:
observed in phylogenetic trees, can lead to reduced accuracy or precision of phylogenetic timescale estimates. We analysed simulated data
Data from: Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
负责人:
关键词:
working distribution;marginal likelihood;MCMC;phylogenetics;Bayes factor;Bayesian inference;coalescent model
DOI:
doi:10.5061/dryad.8tm76
摘要:
uce a “working” distribution on the space of genealogies, that enables estimating marginal likelihoods while accommodating phylogenetic uncertainty. We propose

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