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Data from: Bayesian species delimitation can be robust to guide tree inference errors
- 负责人：
- DOI：
- doi:10.5061/dryad.m1r32
- 摘要：
- in the reversible-jump Markov chain Monte Carlo (rjMCMC) algorithm (Green, 1995). It has been pointed out that the method tends to over-split if a random population
Data from: Association between severity of MERS-CoV infection and incubation period
- 负责人：
- DOI：
- doi:10.5061/dryad.v3546
- 摘要：
- We analyzed data for 170 patients in South Korea who had laboratory-confirmed infection with Middle East respiratory syndrome coronavirus. A longer incubation period was associated with a reduction in the risk for death (adjusted odds ratio/1-day increase in incubation period 0.83, 95% credibility interval 0.68–1.03).
Data from: Bayesian adaptive Markov Chain Monte Carlo estimation of genetic parameters
- 负责人：
- 关键词：
- Hordeum vulgare L.
- DOI：
- doi:10.5061/dryad.0p88f
- 摘要：
- s is of great importance in both natural and breeding populations. Here we propose a new fast adaptive Markov Chain Monte Carlo (MCMC) sampling algorithm
Data from: Bayesian model selection with BAMM: effects of the model prior on the inferred number of diversification shifts
- 负责人：
- DOI：
- doi:10.5061/dryad.0564q
- 摘要：
- ross a broad range of prior parameterizations. We also assessed the impact of the model prior on MCMC convergence times and on diversification rate estimates
Data from: Ancestral character estimation under the threshold model from quantitative genetics
- 负责人：
- DOI：
- doi:10.5061/dryad.4t157
- 摘要：
- Markov chain Monte Carlo (MCMC) to sample the liabilities of ancestral and tip species, and the relative positions of two or more thresholds, from their joint posterior probability
Data from: Bayesian methods for estimating GEBVs of threshold traits
- 负责人：
- DOI：
- doi:10.5061/dryad.pp551
- 摘要：
- e correspondingly termed BayesTA, BayesTB and BayesTC?. Computing procedures of the three BayesT methods using Markov Chain Monte Carlo (MCMC) algorithm were derived
Data from: Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
- 负责人：
- DOI：
- doi:10.5061/dryad.1355
- 摘要：
- erest in the possibility of time dependency for molecular rate estimates. Here we provide a critical assessment of Bayesian MCMC analysis for the estimation
Data from: Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposals
- 负责人：
- DOI：
- doi:10.5061/dryad.n7n85
- 摘要：
- t the situation can be resolved by heating the proposal density. The results demonstrate that relative to the widely-used MCMC-based algorithm implemented
Data from: A Bayesian method for analyzing lateral gene transfer
- 负责人：
- 关键词：
- MCMC Lateral gene transfer Horizontal gene transfer Gene duplication Gene loss Phylogenetics Phylogenomics Bayesian Reconciliation
- DOI：
- doi:10.5061/dryad.f78r2
- 摘要：
- ral remain debated. We present a Bayesian MCMC-based method that integrates gene duplication, gene loss, LGT, and sequence evolution, and apply the method
Data from: The efficacy of consensus tree methods for summarising phylogenetic relationships from a posterior sample of trees estimated from morphological data
- 负责人：
- 关键词：
- consensus trees;total-evidence dating;morphology;Bayesian phylogenetics;divergence time estimation
- DOI：
- doi:10.5061/dryad.66s9h
- 摘要：
- Consensus trees are required to summarise trees obtained through MCMC sampling of a posterior distribution, providing an overview of the distribution
