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Data from: Efficient exploration of the space of reconciled gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.pv6df
- 摘要：
- sizes, we demonstrate that ALE produces more accurate gene trees even if the model of sequence evolution is greatly simplified. Finally, examining 1099
Data from: Investigating the timing of origin and evolutionary processes shaping regional species diversity: insights from simula
- 负责人：
- DOI：
- doi:10.5061/dryad.d0m4r
- 摘要：
- ng species divergence ranks, which is a method widely used in meta-analyses. Divergence ranks consist of categorizing cladogenetic events to certain periods of ti
Data from: Demographic model selection using random forests and the site frequency spectrum
- 负责人：
- DOI：
- doi:10.5061/dryad.2j27b
- 摘要：
- ted to the simulation and summarization of large SNP data sets. We evaluate the performance of these improvements using simulation and find low overall error rates
Data from: Bayesian divergence-time estimation with genome-wide SNP data of sea catfishes (Ariidae) supports Miocene closure of the Panamanian
- 负责人：
- DOI：
- doi:10.5061/dryad.f8k84
- 摘要：
- populations before the isthmus closure around 3 Ma. Our reanalysis with the multi-species coalescent model shifts all of these divergence times to ages younge
Data from: Phylogeny of Saxifragales (angiosperms, eudicots): analysis of a rapid, ancient radiation
- 负责人：
- DOI：
- doi:10.5061/dryad.684
- 摘要：
- r distribution of phylogenetic signal as the five sampled gene sequences suggests a limit to achievable branch support. We use statistical tests of difference
Data from: Unconstrained evolution in short introns?—An analysis of genome-wide polymorphism and divergence data from Drosophila
- 负责人：
- DOI：
- doi:10.5061/dryad.t201q
- 摘要：
- with the polymorphism data and using a generalized linear model, we find evidence for shared ancestral polymorphism between D. melanogaster and D. simulans/D. se
Data from: Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.gv1q5
- 摘要：
- st time, full nonparametric bootstrap analyses to be conducted under complex site-heterogeneous models on large concatenated data matrices. Our simulation
Data from: Dissimilarity of individual microsatellite profiles under different mutation models: empirical approach
- 负责人：
- DOI：
- doi:10.5061/dryad.1b8n2b4
- 摘要：
- Microsatellites (simple sequence repeats, SSRs) still remain popular molecular markers for studying neutral genetic variation. Two alternative model
Simulated transition to agropastoralism in the Indus valley 7500-3000 BC, supplement to: Lemmen, Carsten; Khan, Aurangzeb (2013): A simulation
- 负责人：
- 关键词：
- Model Archaeosociomodeling Baluchistan GLUES Harappa Indus Valley Mehrgarh Neolithic Integrierte Analyse zwischeneiszeitlicher Klimadynamik (INTERDYNAMIK)
- DOI：
- doi:10.1594/pangaea.779706
- 摘要：
- activities in population, Range: 0.0 to 1.0(5) Timing of farming - Description: Time when >=50% are devoted to farming, Units: simulation years since 0001
Data from: Islands of retroelements are major components of Drosophila centromeres
- 负责人：
- DOI：
- doi:10.5061/dryad.rb1bt3j
- 摘要：
- fy the sequence composition and organization of the centromeres of Drosophila melanogaster by combining long-read sequencing, chromatin immunoprecipitati
