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Data from: A simulation-based approach to statistical alignment
负责人:
关键词:
statistical alignment;pairwise alignment;long-indel model;SimBa-SAl;sequence simulations
DOI:
doi:10.5061/dryad.p069231
摘要:
onary dynamics of sequences by inferring relevant probabilistic parameters from input sequences. Despite advances in stochastic modeling during the last two decades, scoring
Data From: Individual Movement - Sequence Analysis Method (Im-Sam): Characterising Spatio-Temporal Patterns Of Animal Trajectories Across Scales
负责人:
关键词:
sequence dissimilarity dendrogram ungulates spatio-temporal habitat use mechanistic movement model
DOI:
doi:10.5281/zenodo.1254230
摘要:
and corresponding simulated habitat use sequences generated in the home range of the specific individual (900 simulated sequences: 6 habitat selecti
Data From: Individual Movement - Sequence Analysis Method (Im-Sam): Characterising Spatio-Temporal Patterns Of Animal Trajectories Across Scales
负责人:
关键词:
sequence dissimilarity dendrogram ungulates spatio-temporal habitat use mechanistic movement model
DOI:
doi:10.5281/zenodo.1254229
摘要:
and corresponding simulated habitat use sequences generated in the home range of the specific individual (900 simulated sequences: 6 habitat selecti
Data from: Epistatic contributions promote the unification of incompatible models of neutral molecular evolution
负责人:
关键词:
DOI:
doi:10.5061/dryad.2ngf1vhj8
摘要:
observations from previously disjointed evolutionary models of sequences. ?The relationship between site restriction and heterotachy is characterized by tracking
Data from: Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences
负责人:
关键词:
RADtags;species delimitation;phylogenetic;Next-generation sequencing;RADseq;phylogeography
DOI:
doi:10.5061/dryad.jf361
摘要:
simulations, focusing specifically on RAD sequences, to highlight some of the unforeseen consequence of excluding missing data from next-generation sequencing
Data from: PSMC (pairwise sequentially Markovian coalescent) analysis of RAD (restriction site associated DNA) sequencing data
负责人:
关键词:
Pairwise Sequential Markovian Coalescent (PSMC);whole genome sequencing;threespine stickleback;demographic history;RAD sequencing
DOI:
doi:10.5061/dryad.0618v
摘要:
-genome sequence suggests a relatively recent expansion and decline within ca. 4000–40 000 generations ago, possibly reflecting postglacial expansion and founding
Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
负责人:
关键词:
Simulation;Markov chain Monte Carlo;Bayesian;phylogenetic;Posterior Predictive Distribution;Sequence Evolution;model fit
DOI:
doi:10.5061/dryad.nc866
摘要:
mates. The field of phylogenetics lacks a direct method to identify cases where model specification adversely affects inferences. Posterior predictive simulation
Data from: Robust design for coalescent model inference
负责人:
关键词:
population genetic inference;structured coalescent;Experimental design;sequential Markovian coalescent;Coalescent Theory;skyline models
DOI:
doi:10.5061/dryad.n7rm21c
摘要:
ve literature on coalescent inference methodology, there is comparatively little work on experimental design. The research that does exist is largely simulation
Data from: Simple versus complex models of trait evolution and stasis as a response to environmental change
负责人:
关键词:
Stasis;gradualism;punctuated equilibrium;Phanerozoic;climate change
DOI:
doi:10.5061/dryad.m010p
摘要:
e sensitively detect noisy trends. Complex evolutionary models are often favored, overwhelmingly so for sequences comprising many samples. This finding

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