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Data from: Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
- 负责人：
- DOI：
- doi:10.5061/dryad.370nq
- 摘要：
- The recent emergence of barcoding approaches coupled to those of Next Generation Sequencing (NGS) have raised new perspectives for studying
-enriched shotgun pyrosequencing.
- 负责人：
- DOI：
- doi:10.5061/dryad.gg0jm
- 摘要：
- Recent developments in sequencing technologies and bioinformatics analyses provide an unprecedented opportunity for cost and time effect
Data from: Genome sequencing and comparative analysis of three Chlamydia pecorum strains associated with different pathogenic outcomes
- 负责人：
- DOI：
- doi:10.5061/dryad.np597
- 摘要：
- PV3056/3) were determined using Illumina/Solexa and Roche 454 genome sequencing. Results: Gene order and synteny was almost identical between C. pecorum
Data from: The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding
- 负责人：
- DOI：
- doi:10.5061/dryad.5pd17
- 摘要：
- BACKGROUND: Next-generation sequencing methods have contributed to rapid progress in the fields of genomics and population genetics. Using this high
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
- 负责人：
- 关键词：
- NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
- DOI：
- doi:10.5061/dryad.50125
- 摘要：
- s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: ITS all right mama: Investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock
- 负责人：
- DOI：
- doi:10.5061/dryad.n4cv3
- 摘要：
- and 454 sequencing of the ITS2 region from fungal mock communities of different complexities. We evaluated the chimera detecting ability of two common chimera-checking
Data from: High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries
- 负责人：
- Malausa, Thibaut
- 关键词：
- Population Genetics - Empirical Genomics/Proteomics Bioinfomatics/Phyloinfomatics Fungi Insects genetic markers
- DOI：
- doi:10.5061/dryad.8297
- 摘要：
- e a high-throughput method for isolating microsatellite markers based on coupling multiplex microsatellite enrichment and Next-Generation Sequencing on 454
Data from: Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts
- 负责人：
- 关键词：
- 454 sequencing;crested newt;Gene tree;transcriptome;multi-species coalescent;Triturus;marbled newt
- DOI：
- doi:10.5061/dryad.mm81p
- 摘要：
- -coding genes, obtained with 454 sequencing. Our dataset includes twenty Triturus newts and represents all nine species. Bayesian analysis of population structure
Data from: Molecular study of bacterial diversity within the trophosome of the vestimentiferan tubeworm Ridgeia piscesae
- 负责人：
- DOI：
- doi:10.5061/dryad.4gk80
- 摘要：
- in R. piscesae using two methodological approaches not yet applied to this symbiosis. We carried out 454-pyrosequencing on trophosome samples from 46 individual
Data from: Analyzing reticulate relationships using CpDNA and pyrosequenced ITS1 as exemplified by Veronica subgen. Pseudolysimachium (Plantaginaceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.bc111
- 摘要：
- ). Our second approach, pyrosequencing of ITS1, generated up to nine different unique sequences per individual and phylogenetic analyses of the datase
