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Data from: The QRS (Quantification of Representative Sequences) pipeline for amplicon sequencing: case study on within-population ITS1
负责人:
关键词:
cloning\/sanger sequencing;ITS1 region;Caullerya mesnili;Amplicon Sequencing
DOI:
doi:10.5061/dryad.v7f7r
摘要:
whether the estimated frequency of representative sequences, generated by 454 amplicon sequencing, differs significantly from that obtaine
Data from: Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens
负责人:
关键词:
DNA Barcoding;Genomics\/Proteomics;Next-generation sequencing;insects;species identification;taxonomy;Lepidoptera
DOI:
doi:10.5061/dryad.p25vn
摘要:
, inferior to next-generation sequencers, which are capable of producing millions of sequence reads simultaneously. Additionally, direct Sanger sequencing
Data from: Lessons learned from microsatellite development for non-model organisms using 454 pyrosequencing
负责人:
关键词:
Comparative studies;shotgun sequencing;next generation sequencing technology;population genetics;massively parallel sequencing;conservation genetics
DOI:
doi:10.5061/dryad.22p7m
摘要:
. Next Generation Sequencing techniques such as 454 pyrosequencing allow the rapid development of microsatellite markers in nonmodel organisms. 454 pyrosequencin
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
负责人:
关键词:
microsatellite discovery;Next Generation Sequencing;Ephydra packardi;Python
DOI:
doi:10.5061/dryad.n65k2
摘要:
-throughput Illumina DNA sequencing data. The program suite contains 3 analysis modules along with a fourth control module that can automate analyse
Data from: Species level phylogeny and polyploid relationships in Hordeum (Poaceae) inferred by next-generation sequencing and in-silico cloning
负责人:
关键词:
Multispecies coalescent;nuclear single-copy genes;in-silico cloning;polyploidy;Hordeum;phylogeny;Evolution;systematics
DOI:
doi:10.5061/dryad.fn2nt
摘要:
ed in a single run on a 454 platform. Reference sequences were obtained by cloning and Sanger sequencing of all loci for nine supplementary individuals. The 454
Data from: High-throughput microsatellite marker development in two sparid species and verification of their transferability in the family Sparidae
负责人:
关键词:
454 sequencing;Lithognathus lithognathus;Sparidae;cross-species amplification;FIASCO microsatellite enrichment;Pachymetopon blochii
DOI:
doi:10.5061/dryad.320kb06t
摘要:
Recently, 454 sequencing has emerged as a popular method for isolating microsatellites owing to cost-effectiveness and time saving. In this study
Data from: Microsatellite markers from the Ion Torrent: a multi-species contrast to 454 shotgun sequencing
负责人:
关键词:
Macrozamia riedlei;Podocarpus drouynianus;Plant Mating Systems;Landscape Genetics;Ricinocarpos brevis;Angiosperms;Ecological Genetics;Gymnosperms;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.vv82q
摘要:
pyro-sequencing (454). More recent platforms such as the PGM semiconductor sequencer (Ion Torrent) offer potential benefits such as dramatic reductions
Data from: Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the advantages
负责人:
关键词:
454 sequencing;wolverine;Gulo gulo;multi-locus genes;pyrosequencing;Major histocompatibility complex;Holocene
DOI:
doi:10.5061/dryad.s5b40
摘要:
is challenging in nonmodel vertebrates. The traditional method of extensive cloning and Sanger sequencing is costly and time-intensive and indirect method
Data from: Nonspecific PCR amplification by high-fidelity polymerases: implications for next-generation sequencing of AFLP markers.
负责人:
Brelsford, Alan
关键词:
454 Population genomics AFLP PCR proofreading polymerase high-fidelity polymerase
DOI:
doi:10.5061/dryad.1hg75
摘要:
High-fidelity “proofreading” polymerases are often used in library construction for next-generation sequencing projects, in an effort to minimize
Data from: Sequence data for Clostridium autoethanogenum using three generations of sequencing technologies
负责人:
关键词:
454;Ion Torrent;Clostridium autoethanogenum;Sanger;Methylation;Illumina;PacBio;Next Generation DNA Sequencing
DOI:
doi:10.5061/dryad.6fm1p
摘要:
During the past decade, DNA sequencing output has been mostly dominated by the second generation sequencing platforms which are characterized

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