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Data from: Pitfalls during in silico prediction of primer specificity for eDNA surveillance
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DOI:
doi:10.5061/dryad.41ns1rnb7
摘要:
of 12 primer pairs were further tested with SYBR Green-based or TaqMan-based singleplex quantitative PCR (qPCR). We disentangle the relative importa
Data from: Development and validation of rapid environmental DNA (eDNA) detection methods for bog turtle (Glyptemys muhlenbergii)
负责人:
关键词:
bog turtle;C. elegans;DNA extraction;Environmental DNA;internal control;Glyptemys muhlenbergii;sample interference;qPCR inhibition;eDNA;DNA recovery
DOI:
doi:10.5061/dryad.6n7675r
摘要:
can be ineffective due to the turtle’s wetland habitat, small size, and burrowing nature. Molecular methods, such as qPCR, provide the ability to ove
Data from: Clearing muddied waters: capture of environmental DNA from turbid waters
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关键词:
terrestrial;Environmental DNA;turbid;optimization
DOI:
doi:10.5061/dryad.835s6
摘要:
to quantitative PCR and found that quantitative PCR was more sensitive in detecting lower concentrations of eDNA. We show significant differences in efficiencies amo
Data from: Increasing the accuracy and precision of relative telomere length estimates by RT qPCR
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关键词:
Telomeres;repeatability;qPCR;Molecular aging;statistical power
DOI:
doi:10.5061/dryad.7356h
摘要:
length analysis with in-gel hybridisation), could be improved. We find qPCR repeatability (intra- and inter-assay levels) to be at similar levels across thr
Data from: Environmental DNA analysis of river herring in Chesapeake Bay: a powerful tool for monitoring threatened keystone species
负责人:
关键词:
anadramous;Alewife;blueback herring;Alosa psuedoharengus;Alosa aestivalis;qPCR;eDNA;Monitoring
DOI:
doi:10.5061/dryad.n60t8b3
摘要:
presence and abundance data to traditional methods of quantification (ichthyoplankton sampling and adult observations). Overall, the qPCR assay showed ve
Data from: Factors influencing detection of eDNA from a stream-dwelling amphibian
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关键词:
Amphibians Environmental DNA Idaho giant salamander DNA degradation qPCR
DOI:
doi:10.5061/dryad.mt60p
摘要:
ng stream-dwelling salamanders and quantitative PCR (qPCR) analysis, we conducted three experiments to assess eDNA: (1) production rate, (2) persistence ti
Data from: Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
负责人:
关键词:
Wasmannia auropunctata;Mixornis gularis;Next-generation sequencing;genotyping;Saccharomyces cervisiae;RAD-seq;methodology
DOI:
doi:10.5061/dryad.34dt1
摘要:
with inflated confidence as a result of PCR duplicates. Quantification of library complexity by adaptor tagging does not significantly increase the difficulty
Data from: The differential impact of a native and a non-native ragwort species (Senecioneae) on the first and second trophic leve
负责人:
关键词:
quantitative PCR;primary decomposers;bacterivorous nematodes
DOI:
doi:10.5061/dryad.t4313
摘要:
ken into consideration. Quantitative PCR assays for the analyses of bacterial and fungal communities at a high taxonomic level were opti
Data from: MicroRNA stability in FFPE tissue samples: dependence on GC content
负责人:
关键词:
human;MiRNA
DOI:
doi:10.5061/dryad.fj0f8
摘要:
in FFPE cardiac tissues instead of miR-1, which was predominant before fixation. Subsequent quantitative PCR (qPCR) analyses revealed that miRNAs

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