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Data from: A long PCR based approach for DNA enrichment prior to next-generation sequencing for systematic studies
负责人:
关键词:
Lupinus leucophylla Douglas ex Lindl.;Abies fraseri (Pursh) Poir;Castilleja linariifolia Benth.;Castilleja covilleana L.F.Hend.;Castilleja elmeri Fernald;Crataegus columbiana Howell;Bartsia inaequalis Benth.;Abies amabilis Douglas ex J.Forbes;Castilleja ortegae Standl.;Abies grandis (Douglas ex D. Don) Lindley;Poa bulbosa L.;Nuphar polysepalum Engelm.;Castilleja pallescens Greenm.;Next-generation sequencing;Universal Chloroplast PCR Primers;Penstemon montanus Greene var idahoensis (Keck) Cronq.;Bromus tectorum L.;Long PCR;Castilleja applegatei Fernald;Capsella bursa-pastoris (L.) Medik.;Castilleja miniata Douglas ex Hook.;Salix scouleriana Barrat ex. Hook.;Chloroplast Enrichment;Alnus rhombifolia Nutt.;Balsamorhiza sagittata (Pursh) Nutt.;Castilleja lineariloba (Benth.) T.I.Chuang & Heckard;Plastome;Castilleja victoriae Fairbarns & J.M.Egger;Castilleja arvensis Cham. & Schltdl.;Lomatium dissectum (Nutt) Mathias & Constance;Castilleja virgata (Domb. ex Wedd.) Edwin;Balsamorhiza hookeri Nutt;Bartsia stricta (Kunth) Benth.;Polygonum douglasii Greene;Castilleja oresbia Greenm.;Angiosperms;Lamourouxia virgata Kunth;Umbellularia californica (Hook. & Arn.) Nutt.;Senecio integerrimus Nutt. var exaltatus (Nutt.) Cronq.
DOI:
doi:10.5061/dryad.kc75n
摘要:
a set of 58 potentially universal primers for angiosperms to do so. Additionally, this approach is likely to be particularly useful for nuclear regions
Data from: Digging for DNA at depth: rapid universal metabarcoding surveys (RUMS) as a tool to detect coral reef biodiversity across a depth gradient
负责人:
关键词:
Environmental DNA;Demospongiae;Anthozoa;Environmental DNA;Next-generation sequencing;18S ribosomal DNA;Invertebrate;Demospongiae;Holocene;Marine
DOI:
doi:10.5061/dryad.37qv5rd
摘要:
. We here investigate the potential for rapid universal metabarcoding surveys (RUMS) of eDNA in sediment samples to provide snapshots of eukaryotic
Data from: Resolving rapid radiations within angiosperm families using anchored phylogenomics
负责人:
关键词:
Scirpeae;Trichophorum;Dulichieae;low-copy nuclear genes;low-level phylogenetics;Eriophorum;Scirpus;Khaosokia;Amphiscirpus;Cariceae;flowering plants;universal hybrid enrichment probes;Coalescent species tree;Carex;Calliscirpus
DOI:
doi:10.5061/dryad.55h30
摘要:
ll based on only two regions, the plastid genome and nuclear ribosomal DNA (nrDNA). Their popularity can be explained by high copy numbers and universal
Data from: Next-generation sequencing for rodent barcoding: species identification from fresh, degraded and environmental samples
负责人:
关键词:
molecular species identification;Diet Analysis;environmental barcoding;DNA Barcoding;Rodentia;Molecular taxonomy;Next-generation sequencing
DOI:
doi:10.5061/dryad.1j6v6
摘要:
sets of 115 rodent species, a 136 bp fragment of cytochrome b was selected as the most discriminatory mini-barcode, and rodent universal primers surrounding
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
负责人:
关键词:
NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
DOI:
doi:10.5061/dryad.50125
摘要:
was amplified for each sample using barcoded universal primers. Amplicons were multiplexed and processed on the distinct sequencers. The resulting datasets wer
Data from: DNA metabarcoding unveils multi?scale trophic variation in a widespread coastal opportunist
负责人:
关键词:
Environmental DNA;Metabarcoding;Crustaceans;Foodwebs;Community Ecology;Diet Analysis
DOI:
doi:10.5061/dryad.sk2155m
摘要:
and powerful way forward. Here, we assessed the application of DNA?metabarcoding with nearly universal primers for the mitochondrial marker
Data from: Mining microsatellite markers from public expressed sequence tags databases for the study of threatened plants
负责人:
关键词:
population genetics;conservation;Oryza;Arabidopsis;Evolution;functional markers;EST-SSR;threatened plants
DOI:
doi:10.5061/dryad.63h33
摘要:
a which were mined for SSRsand their primers with the help of QDD1. Genome distribution analyses in Oryza and Arabidopsis were done by blasting the sequence
Data from: Applying plant DNA barcodes to identify species of Parnassia (Parnassiaceae)
负责人:
关键词:
Biotechnology;Parnassia;systematics;DNA Barcoding;Angiosperms
DOI:
doi:10.5061/dryad.rb66j52h
摘要:
ults demonstrated that all four candidate DNA markers have a maximum level of primer universality and sequencing success. As single DNA marker
Códigos de barras de la vida en peces y zooplancton de México
负责人:
CONABIO Comisión Nacional Para El Conocimiento Y Uso De La Biodiversidad;;Olvera, Sonia Alejandra Careaga
关键词:
DOI:
doi:10.15468/xmbkgo
摘要:
o más coloquialmente códigos de barras, barcodes en inglés), por lo que puede utilizarse como un marcador universal para el reconocimiento de las especies. A partir de

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