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Data from: High-throughput identification of informative nuclear loci for shallow-scale phylogenetics and phylogeography
负责人:
关键词:
Pseudacris;Hyla;Next-generation sequencing;Acris;phylogenetics;reduced-representation library;Illumina HiSeq;anonymous nuclear markers;phylogeography
DOI:
doi:10.5061/dryad.vh151q1c
摘要:
to generating thousands of variable, single-copy nuclear loci for any system using next-generation sequencing. We performed Illumina paired-end sequencing of thr
Data from: De novo sequencing and assembly of Azadirachta indica fruit transcriptome
负责人:
关键词:
Next-generation sequencing;transcriptome;neem;Azadirachta indica
DOI:
doi:10.5061/dryad.4sh70
摘要:
-development programme which systematically exploits the therapeutic ability of Azadirachta fruits remains to be fully established. Next generation sequencing tec
Data from: Inferring the mode of origin of polyploid species from next-generation sequence data
负责人:
关键词:
approximate Bayesian computation;Capsella;Polyploidization;Disomic inheritance;speciation
DOI:
doi:10.5061/dryad.g611t
摘要:
on (ABC), applied to realistic traditional and next-generation sequence data, allows correct inference of the evolutionary and demogra
Data from: A high-density linkage map for Astyanax mexicanus using genotyping-by-sequencing technology
负责人:
关键词:
regressive phenotypic evolution;Astyanax mexicanus;Next-generation sequencing;qtl analysis;blind Mexican cave tetra
DOI:
doi:10.5061/dryad.6s718
摘要:
. This remarkable natural experiment has enabled powerful genetic analyses of cave adaptation. Here, we describe the application of next-generation sequencing
Data from: Next-generation sequencing for rodent barcoding: species identification from fresh, degraded and environmental samples
负责人:
关键词:
molecular species identification;Diet Analysis;environmental barcoding;DNA Barcoding;Rodentia;Molecular taxonomy;Next-generation sequencing
DOI:
doi:10.5061/dryad.1j6v6
摘要:
from predators known to ingest rodents. Utilizing next-generation sequencing technologies able to sequence mixes of DNA, 1,140 amplicons were tagge
Data from: Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix)
负责人:
关键词:
DOI:
doi:10.5061/dryad.n8v4v6d
摘要:
for amplicon sequencing on Illumina instruments. In the variant we use most frequently for large-scale projects, we fuse partial adapter sequences (TruSeq or Nextera) ont
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
负责人:
关键词:
microsatellite discovery;Next Generation Sequencing;Ephydra packardi;Python
DOI:
doi:10.5061/dryad.n65k2
摘要:
modules can also be used independently to provide greater flexibility or to work with FASTQ or FASTA files generated from other sequencing platforms (Roche
Data from: Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta
负责人:
关键词:
Boechera stricta;0.2 MYA;ancestral polymorphism;Genomic Diversity;Balancing selection;speciation
DOI:
doi:10.5061/dryad.574pc6n
摘要:
nome re-sequencing data from 517 Boechera stricta accessions, we identify four genetic groups that diverged around 30 - 180 thousand years ago, with long-term sma
Data from: Deep sequencing of a candidate region harboring the SOX9 gene for the canine XX disorder of sex development
负责人:
Grzemski, Adrian
关键词:
dog intersexuality DSD SOX9 MAGI2 CNV lincRNA RevSex
DOI:
doi:10.5061/dryad.65th7
摘要:
harboring the SOX9 gene. We applied a genome-wide association study and targeted next-generation sequencing techniques to compare DSD and normal female
Data from: Next generation lineage discovery: a case study of tuberous Claytonia L.
负责人:
关键词:
New species;edaphic;SVD quartets;Reticulation;Claytonia crawfordii;Elliptical Fourier Analysis;ddRAD;statistical ordination;Next Generation Sequencing;genome skimming;Montiaceae
DOI:
doi:10.5061/dryad.m99v4
摘要:
: We used modern sequencing technology to identify lineages of perennial Claytonia L., and assessed correspondence between genetic lineages and morphological

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