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Data from: Mass production of SNP markers in a nonmodel passerine bird through RAD sequencing and contig mapping to the zebra finch genome
- 负责人：
- DOI：
- doi:10.5061/dryad.755b5
- 摘要：
- Here, we present an adaptation of restriction-site-associated DNA sequencing (RAD-seq) to the Illumina HiSeq2000 technology that we used to produce
Data from: Information dropout patterns in restriction site associated DNA phylogenomics and a comparison with multilocus Sanger data in a speci
- 负责人：
- DOI：
- doi:10.5061/dryad.474nd
- 摘要：
- A rapid shift from traditional Sanger sequencing-based molecular methods to the phylogenomic approach with large numbers of loci is underway. Amo
Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
- 负责人：
- DOI：
- doi:10.5061/dryad.8g470
- 摘要：
- . Here, we estimated genotyping error rates in SNPs genotyped with double digest RAD sequencing from Mendelian incompatibilities in known mother-offspring
Data from: Next-generation museomics disentangles one of the largest primate radiations
- 负责人：
- DOI：
- doi:10.5061/dryad.7k14q
- 摘要：
- in ecology, behavior, and morphology. This variation led to the description of over 60 species and subspecies. Here, using next-generation DNA sequencing (NGS
RAD Sequencing for SNP Discovery in Two Populations of Bighorn Sheep (Ovis canadensis)" in Genomic Resources Notes accepted 1 April 2013" data-category="" data-cropid="" data-dimen="" data-id="b378718b-f979-11ea-ae96-0242ac110002"> Data from: "RAD Sequencing for SNP Discovery in Two Populations of Bighorn Sheep (Ovis canadensis)" in Genomic Resources Notes accepted 1 April 2013
- 负责人：
- DOI：
- doi:10.5061/dryad.4qk81
- 摘要：
- (Ovis canadensis). To do so we used restriction-site associated DNA (RAD) sequencing of four individuals from each population. Through alignment of read
Data from: Identification of SNP markers for inferring phylogeny in temperate bamboos (Poaceae: Bambusoideae) using RAD sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.1mj31
- 摘要：
- sequence variants, of which c. 13 000 are segregating between species, and c. 3000 segregating between populations within each species. Analyses based on these RAD
Data from: Microfluidic PCR-based target enrichment: a case study in two rapid radiations of Commiphora (Burseraceae) from Madagascar
- 负责人：
- DOI：
- doi:10.5061/dryad.591q3
- 摘要：
- library preparation. After sequencing, we evaluated the ability of the loci to resolve species level relationships within two recently radiated lineages
Data from: De novo sequencing and assembly of Azadirachta indica fruit transcriptome
- 负责人：
- DOI：
- doi:10.5061/dryad.4sh70
- 摘要：
- -development programme which systematically exploits the therapeutic ability of Azadirachta fruits remains to be fully established. Next generation sequencing technology
Data from: Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the ad
- 负责人：
- DOI：
- doi:10.5061/dryad.s5b40
- 摘要：
- is challenging in nonmodel vertebrates. The traditional method of extensive cloning and Sanger sequencing is costly and time-intensive and indirect method
Data from: Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae
- 负责人：
- DOI：
- doi:10.5061/dryad.r9c12
- 摘要：
- and sequencing. Following quality control to remove probable paralogs from these sequence data, the final dataset comprised 259,313 bases from 194 loci for 24
