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Data from: Phylogenetic ANCOVA: estimating changes in evolutionary rates as well as relationships between traits
负责人:
关键词:
parental care;Macroevolution;Life history: evolution;Phylogenetics: comparative;morphology;bird;telencephalon;Allometry;Aves;Phylogenetics: diversification;Phylogenetics: methods
DOI:
doi:10.5061/dryad.2r504
摘要:
el the impact of a key innovation, colonization of a new habitat, or environmental change. The approach is optimized with maximum likelihood and is formulated
Data from: Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes
负责人:
关键词:
systematics;Serpentes
DOI:
doi:10.5061/dryad.rb5nc
摘要:
full likelihood-based estimates of the multi-species coalescent, and approximate the true species-tree using simpler summary metrics. These methods converge
Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
负责人:
关键词:
admixture;Population Divergence;transcriptome;maximum likelihood;Biorhiza pallida;statistical phylogeography;Belizinella gibbera;Pleistocene
DOI:
doi:10.5061/dryad.r3r60
摘要:
blocks can be used to fit explicit models of population divergence and admixture in a likelihood framework. To illustrate our approach, we reconstruct
Data from: A likelihood-based comparison of population histories in a parasitoid guild
负责人:
关键词:
comparative phylogeography;Late Pleistocene;Mesopolobus amaenus;Hobbya stenonota;Population Divergence;Cecidostiba semifascia;community assembly;maximum likelihood;Cecidostiba fungosa
DOI:
doi:10.5061/dryad.0g0fs
摘要:
galls. We develop a likelihood method to numerically estimate models of divergence between three populations from multilocus data. We investigate
Data from: Phylogeny of Saxifragales (angiosperms, eudicots): analysis of a rapid, ancient radiation
负责人:
关键词:
phylogenetic resolution;hypothesis testing;Saxifragales;ribosomal DNA;data partition congruence;rapid radiation;chloroplast genes;maximum likelihood estimation
DOI:
doi:10.5061/dryad.684
摘要:
ng an array of methods that explicitly incorporate assumptions about evolutionary process (weighted maximum parsimony, maximum likelihood, LogDet/parali
Data from: Accurate estimation of substitution rates with neighbour-dependent models in a phylogenetic context
负责人:
关键词:
neighbour-dependent substitution;CpG hypermutability;CpG islands;maximum likelihood phylogeny
DOI:
doi:10.5061/dryad.5vp21b10
摘要:
els. We assess how efficient this approach is at inferring the CpG hypermutability rate from aligned DNA sequences. The method is tested on simu
lian Enigma"" data-category="" data-cropid="" data-dimen="" data-id="b34e587f-f979-11ea-ae96-0242ac110002"> Data from: Australian Lasioglossum + Homalictus Form a Monophyletic Group: Resolving the "Australian Enigma"
负责人:
关键词:
Biogeography;elongation factor-1?;maximum likelihood;phylogeny;Social evolution
DOI:
doi:10.5061/dryad.637
摘要:
three exons plus two introns) for 89 species (17 outgroups plus 72 ingroups). Parsimony and maximum likelihood analyses provide strong evidence tha
Data from: Multiple data sets, congruence, and hypothesis testing for the phylogeny of basal groups of the lizard genus Sceloporus (Squama
负责人:
关键词:
character congruence;parsimony;Biogeography;maximum likelihood;phylogeny;weighted parsimony;Sceloporus
DOI:
doi:10.5061/dryad.604
摘要:
, and maximum likelihood models, are only weakly supported by the traditional indices, and this methodological concordance is taken as evidence for insensitivity
Data from: A general model for estimating macroevolutionary landscapes
负责人:
关键词:
diffusion;selection;bounds;Macroevolution;Adaptation;FPK model;MCMC methods;maximum-likelihood estimation;phylogenetic comparative data
DOI:
doi:10.5061/dryad.28g37
摘要:
of parameter inference. We provide R code to fit the model to empirical data using either maximum-likelihood or Bayesian estimation, and illustrate the use of this cod

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