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Data from: Estimating genotyping errors from genotype and reconstructed pedigree data
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.vv0gg
- 摘要：
- le from natural populations in the wild. 3. I proposed a maximum likelihood method to reconstruct pedigrees from genotype data with errors occurring
Data from: Testing Phylogenetic Methods with Tree Congruence: Phylogenetic Analysis of Polymorphic Morphological Characters in Phrynosomatid Lizards
- 负责人：
- DOI：
- doi:10.5061/dryad.111
- 摘要：
- distance), and continuous maximum likelihood. The effects of excluding polymorphic characters and character weighting (a priori and successive) were als
methods
- 负责人：
- DOI：
- doi:10.5061/dryad.p1m52
- 摘要：
- - Maximum Likelihood (SMRT-ML), a concatenation method that is consistent even when gene trees exhibit topological differences due to the multispecies coalescent
Data from: Robust regression and posterior predictive simulation increase power to detect early bursts of trait evolution
- 负责人：
- 关键词：
- Predictive Simulations;early burst;Comparative Methods;Adaptive Radiations;Quantitative Characters
- DOI：
- doi:10.5061/dryad.sp521
- 摘要：
- t they outperform maximum likelihood approaches at identifying early bursts at moderate strength. Second, we use a robust regression procedure that allows
Data from: Short tree, long tree, right tree, wrong tree: new acquisition bias corrections for inferring SNP phylogenies
- 负责人：
- 关键词：
- maximum likelihood;reconstituted DNA;Phrynosomatidae;ddRADseq;conditional likelihood;Phrynosoma
- DOI：
- doi:10.5061/dryad.t9r3g
- 摘要：
- and a reconstituted DNA approach. The conditional likelihood method conditions on the presence of variable characters only (the number of invariant sites that ar
Data from: Displayed trees do not determine distinguishability under the network multispecies coalescent
- 负责人：
- DOI：
- doi:10.5061/dryad.t2d38
- 摘要：
- ween species. Probabilistic models using the multispecies coalescent can be used in this framework for likelihood-based inference of both network topologies
Data from: Likelihood inference of non-constant diversification rates with incomplete taxon sampling
- 负责人：
- DOI：
- doi:10.5061/dryad.rd2s3
- 摘要：
- r, such complications have been ignored, potentially biasing the conclusions that have been reached. In this study I derive the likelihood
Data from: Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
- 负责人：
- DOI：
- doi:10.5061/dryad.3629v
- 摘要：
- and the relationships within Euarchontoglires and Laurasiatheria. Both Bayesian and maximum-likelihood analysis of genome-wide data of 447 nuclear genes from 37 species
Data from: Evaluating summary methods for multi-locus species tree estimation in the presence of incomplete lineage sorting
- 负责人：
- DOI：
- doi:10.5061/dryad.310q3
- 摘要：
- to address ILS – as well as concatenation under maximum likelihood, the greedy consensus, and two supertree methods (MRP and MRL). Our study shows that seve
Data from: Overcoming the challenge of small effective sample sizes in home-range estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.16bc7f2
- 摘要：
- —when effective sample sizes are small. Residual maximum likelihood (REML) is a widely used method for reducing bias in maximum?likelihood (ML) variance estima
