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Data from: Using linkage maps as a tool to determine patterns of chromosome synteny in the genus Salvelinus
- 负责人：
- DOI：
- doi:10.5061/dryad.75mt7
- 摘要：
- nuscript details the application of restriction site associated DNA sequencing (RADseq) to generate a marker dense genetic map for Brook trout (Salvelinus fontinalis
Data from: Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag
- 负责人：
- DOI：
- doi:10.5061/dryad.44sf1
- 摘要：
- and MAP kinase pathways. In addition, our analysis revealed that a large proportion of the identified SNPs mapping to LG XII are likely to represent alternative alleles
Data from: A dense linkage map of Lake Victoria cichlids improved the Pundamilia genome assembly and revealed a major QTL for sex-determination
- 负责人：
- 关键词：
- RAD;recombination rate;sex chromosome evolution;Cichlidae;XY system;amh;sex determination;synteny
- DOI：
- doi:10.5061/dryad.59q56g6
- 摘要：
- mapping. In the present study we identified and genotyped markers via restriction-site associated DNA (RAD) sequencing and constructed a genetic linkage map
Data from: SNP markers tightly linked to root knot nematode resistance in grapevine (Vitis cinerea) identified by a genotyping-by-sequencing app
- 负责人：
- Smith, Harley
- 关键词：
- root knot nematode genotyping-by-sequencing rootstocks marker-assisted selection single nucleotide polymorphism SNPs
- DOI：
- doi:10.5061/dryad.1d7n9
- 摘要：
- in the root apical meristem. Single nucleotide polymorphisms (SNPs) were identified using genotyping-by-sequencing and results from association and genetic mapping identified
Data from: Exploring a Pool-seq only approach for gaining population genomic insights in non-model species
- 负责人：
- DOI：
- doi:10.5061/dryad.q1h4k0n
- 摘要：
- eviously used to describe the populations (allozymes and individual based SNPs) and from mapping the Pool-seq data to a reference genome of the closely rela
Data from: Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference
- 负责人：
- DOI：
- doi:10.5061/dryad.q14c1
- 摘要：
- q data (>100 individuals) with 312 combinations of methodology (de novo vs. mapping to references of increasing divergence) and filtering criteria
Data from: Generative modeling of multi-mapping reads with mHi-C advances analysis of Hi-C studies
- 负责人：
- DOI：
- doi:10.5061/dryad.v7k3140
- 摘要：
- to the sequencing depth compared to uni-reads, cis-to-trans ratio of contacts, and the broad data quality as reflected by the proportion of mappable reads of datase
Data from: Mass production of SNP markers in a nonmodel passerine bird through RAD sequencing and contig mapping to the zebra finch genome
- 负责人：
- DOI：
- doi:10.5061/dryad.755b5
- 摘要：
- Here, we present an adaptation of restriction-site-associated DNA sequencing (RAD-seq) to the Illumina HiSeq2000 technology that we used to produce
Data from: Combining GWAS and RNA-seq approaches for detection of the causal mutation for hereditary junctional epidermolysis bullosa in sheep
- 负责人：
- 关键词：
- Junctional Epidermolysis Bullosa aplasia cutis congenita integrin beta-4 sheep association mapping whole skin transcriptomic analysis
- DOI：
- doi:10.5061/dryad.4j7jh
- 摘要：
- In this study, we demonstrate the use of a genome-wide association mapping together with RNA-seq in a reduced number of samples
Data from: Large effect quantitative trait loci for salicinoid phenolic glycosides in Populus: implications for gene discovery
- 负责人：
- DOI：
- doi:10.5061/dryad.8h67t
- 摘要：
- discovery and the evolution of defensive chemistry in a model genus. To our knowledge, this is the first study to use a full?sib mapping population to identify QTL intervals
