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Data from: A study of applicability of SNP chips developed for bovine and ovine species to whole-genome analysis of reindeer Rangifer tarandus
负责人:
关键词:
SNP whole genome analysis reindeer Conservation genetics and biodiversity
DOI:
doi:10.5061/dryad.29fp0
摘要:
Two sets of commercially available single nucleotide polymorphisms (SNPs) developed for cattle (BovineSNP50 BeadChip) and sheep (OvineSNP50 BeadChip
Data from: Linkage disequilibrium and inversion-typing of the Drosophila melanogaster Genome Reference Panel
负责人:
关键词:
inversion;linkage disequilibirum;drosophila melanogaster
DOI:
doi:10.5061/dryad.06jt7
摘要:
d r2 ? 0.5 as the cutoff for a highly correlated SNP. We make available the list of all highly correlated SNPs for use in association studies. Seventy-si
Data from: An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka
负责人:
关键词:
conservation genetics;Oncorhynchus nerka;Fish;Holocene;Contemporary Evolution;Ecological Genetics
DOI:
doi:10.5061/dryad.8027
摘要:
. Nevertheless, single nucleotide polymorphisms (SNPs) are becoming increasing popular in many areas of molecular ecology, owing to their high-throughput
Data from: Population genetic inferences using immune gene SNPs mirror patterns inferred by microsatellites
负责人:
关键词:
microsatellites;sequence capture;Target Enrichment;Next-generation sequencing;Next Generation Sequencing;population genomics;immunogenetics;Gopherus polyphemus
DOI:
doi:10.5061/dryad.40c7c
摘要:
Single nucleotide polymorphisms (SNPs) are replacing microsatellites for population genetic analyses, but it is not apparent how many SNPs are nee
Data from: Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks
负责人:
关键词:
SNP detection;Quercus robur;Infinium;genotyping;oaks;cluster compression;Quercus petraea
DOI:
doi:10.5061/dryad.fd862
摘要:
for SNP discovery using both previously obtained Sanger sequences across 676 gene regions (1371 in vitro SNPs) and Roche 454 technology sequences from 5112 contigs
Data from: Ranking and characterization of established BMI and lipid associated loci as candidates for gene-environment interactions
负责人:
关键词:
Lipids;gene × environment interaction;complex disease;metabolic traits;variance heterogeneity;gene × lifestyle interaction;heterogeneity of variance;prioritization;BMI
DOI:
doi:10.5061/dryad.q1m7t
摘要:
), G·E interaction effects (with smoking and physical activity), and marginal genetic effects (Pm). Correlations between Pv and Pm were stronger for SNPs with established
Data from: Mining for single nucleotide polymorphisms and insertions / deletions in expressed sequence tag libraries of oil palm
负责人:
关键词:
Elaeis oleifera;Shannon index;in silico;Elaeis guineensis;molecular markers
DOI:
doi:10.5061/dryad.157
摘要:
ng the six tissues from which the EST libraries had been generated, mesocarp had high frequency of 2.91 SNPs and indels per 100 bp wherea
Data from: Testing pipelines for genome-wide SNP calling from Genotyping-By-Sequencing (GBS) data for Pinus ponderosa
负责人:
关键词:
pipeline;reference-based;SNP;Pinus ponderosa;de novo;now;GBS
DOI:
doi:10.5061/dryad.6fv8fb4
摘要:
sequence data from 94 ponderosa pines, we performed SNP calling, using loblolly pine as the reference genome where required. The number of SNPs called
Data from: A comparative assessment of SNP and microsatellite markers for assigning parentage in a socially monogamous bird
负责人:
Kaiser, Sara
关键词:
single nucleotide polymorphism microsatellite paternity RNA-seq social monogamy transcriptome Behavior/Social Evolution Birds Population Genetics - Empirical Animal Mating/Breeding Systems
DOI:
doi:10.5061/dryad.1vn46
摘要:
Single-nucleotide polymorphisms (SNPs) are preferred over microsatellite markers in many evolutionary studies, but have only recently been applied

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