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Data from: Estimating the temporal and spatial extent of gene flow among sympatric lizard populations (genus Sceloporus) in the southern Mexican
负责人:
关键词:
Reptiles;systematics;Sceloporus edwardtaylori;Sceloporus spinosus;phylogeography;hybridization;Sceloporus horridus;Pliocene;Population Genetics - Empirical;Pleistocene
DOI:
doi:10.5061/dryad.3v55p
摘要:
discordance in sympatric populations of S. spinosus and S. horridus owing to mitochondrial introgression. We used coalescent simulations to di
Data from: Phylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)
负责人:
关键词:
DOI:
doi:10.5061/dryad.751cv
摘要:
nomes is still poorly understood. Distinguishing historical hybridization events from other processes leading to phylogenetic discordance among different markers
Data from: Widespread paleopolyploidy, gene tree conflict, and recalcitrant relationships among the carnivorous Caryophyllales
负责人:
关键词:
Caryophyllales;plant carnivory;gene duplication;paleopolyploidy;phylogenomics;gene tree conflict
DOI:
doi:10.5061/dryad.vn730
摘要:
the remaining noncore Caryophyllales as nonmonophyletic, although the node supporting this relationship contained a significant amount of gene tree discordance
Data from: Impacts of inference method and dataset filtering on phylogenomic resolution in a rapid radiation of ground squirrels (Xerinae: Marmotini)
负责人:
关键词:
Marmotini;incomplete lineage sorting;Concatenation;gene tree estimation error;coalescent;UCEs;Miocene - Holocene
DOI:
doi:10.5061/dryad.t358vv1
摘要:
r-locus information content across 4 different inference methods (RAxML, ASTRAL, NJst, SVDquartets). Persistent discordance was found in topology
Data from: Incomplete lineage sorting impacts the inference of macroevolutionary regimes from molecular phylogenies when concatenation is employed
负责人:
关键词:
Cetacea
DOI:
doi:10.5061/dryad.np7332q
摘要:
concatenated loci and molecular dating. However, this practice disregards population-level processes that generate gene tree/species tree discordance
Data from: The pipid root
负责人:
关键词:
Xenopus;Species tree;Coalescence;Gene tree;lineage sorting;high throughout sequencing;pipid;Pipidae
DOI:
doi:10.5061/dryad.66mc094q
摘要:
alogical discordance, recurrent substitution, recombination, ancestral population structure, gene flow after speciation among sampled and unsampled taxa, and variation
Data from: Species delimitation with ABC and other coalescent-based methods: a test of accuracy with simulations and an empirical examp
负责人:
关键词:
Liolaemus laurenti;divergence;Simulation;gene flow;Liolaemus grosseorum;Liolaemus darwinii;gene trees;Holocene;speciation;Pleistocene
DOI:
doi:10.5061/dryad.4409k652
摘要:
of speciation. New species delimitation methods (SDMs) can accommodate non-monophyletic species and gene tree discordance as a result
Data from: Species tree estimation of North American chorus frogs (Hylidae: Pseudacris) with parallel tagged amplicon sequencing
负责人:
关键词:
reduced representation library;Pseudacris;anonymous nuclear locus;phylogenetics;targeted amplicon sequencing;high-throughput sequencing
DOI:
doi:10.5061/dryad.23rc0
摘要:
the relationships among these clades for the first time with strong support. We also found discordance between the mitochondrial and nuclear datasets tha
Data from: Species tree reconstruction of a poorly resolved clade of salamanders (Ambystomatidae) using multiple nuclear loci
负责人:
关键词:
Bayesian;Ambystoma;Gene tree;coalescent;Species tree
DOI:
doi:10.5061/dryad.2gq14
摘要:
The analysis of diverse data sets can yield different phylogenetic estimates that challenge systematists to explain the source of discordance
Data from: Expressed sequence tags reveal Proctotrupomorpha (minus Chalcidoidea) as sister to Aculeata (Hymenoptera: Insecta)
负责人:
Sharanowski, Barbara J.
关键词:
expressed sequence tags (ESTs) phylogenomics gene tree discordance filtered supernetworks
DOI:
doi:10.5061/dryad.1735
摘要:
for 6 disparate Hymenopteran taxa with additional sequences added from public databases for a final dataset of 24 genes for 16 taxa and over 10kb of sequence da

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