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Data from: Disentangling methodological and biological sources of gene tree discordance on Oryza (Poaceae) chromosome 3
负责人:
关键词:
phylogenomics gene trees species trees discordance multilocus data
DOI:
doi:10.5061/dryad.6169b.1
摘要:
and consequences of differing patterns of discordance in the sets of gene trees inferred using a panel of 20 distinct analysis pipelines. We found that discordance
Data from: Prevalence, diversity, and host associations of Bartonella strains in bats from Georgia (Caucasus)
负责人:
关键词:
phylogenetic analysis;bats;Bartonella;Dogs;sequence alignment;Genetic loci;Sequence analysis;host-pathogen interactions
DOI:
doi:10.5061/dryad.f0k4j
摘要:
Phylogenetic analysis based on sequence variation of the gltA gene differentiated 22 unique Bartonella genogroups. Genetic distances between these diverse genogroups wer
Data from: Identifying insecticide resistance genes in mosquito by combining AFLP genome scan and 454 pyrosequencing
负责人:
关键词:
insects;Natural Selection and Contemporary Evolution;molecular evolution;Aedes aegypti;insecticide resistance;Adaptation
DOI:
doi:10.5061/dryad.344852tm
摘要:
. Patterns of sequence variability of this gene showed significant deviation from neutrality in the resistant strain but not in the susceptible strain, eve
Data from: An evaluation of the hybrid speciation hypothesis for Xiphophorus clemenciae based on whole genome sequences
负责人:
Schumer, Molly
关键词:
Hybridization Introgression next-generation sequencing sexual selection incomplete lineage sorting
DOI:
doi:10.5061/dryad.6k7gh
摘要:
nificant evidence for recent gene flow between Xiphophorus species. Though we detect genetic exchange in two pairs of species analyzed, the proportion
Data from: Purifying selection in the toll-like receptors of song sparrows Melospiza melodia
负责人:
Nelson-Flower, Martha
关键词:
immune gene diversity inbreeding coefficient survival toll-like receptor negative selection Subject area: Molecular adaptation and selection
DOI:
doi:10.5061/dryad.10h01t1
摘要:
Variation in immune gene sequences is known to influence resistance to infectious diseases and parasites, and hence survival and mate choice, ac
DNA barcodes from century-old type specimens using next-generation sequencing
负责人:
Page, Roderic D. M.
关键词:
DOI:
doi:10.15468/itpl93
摘要:
rtain. This study addresses this challenge by employing next-generation sequencing (NGS) to recover sequences for the barcode region of the cytochrome c oxidase
Data from: Phylogenetic relatedness determined between antibiotic resistance and 16S rRNA genes in actinobacteria
负责人:
关键词:
Actinobacteria;resistance genes;phylogeny;Actinobacteria;sequenced genome database;16S rRNA diversity;thin layer chromatography
DOI:
doi:10.5061/dryad.td742
摘要:
, distances of erm gene sequences were significantly correlated to phylogenetic distances based on 16S rRNA genes, while ABC transporter gene distances wer
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
负责人:
Cranston, Karen A.
关键词:
phylogenomics rice Oryza BAC-end sequencing missing data gene trees species trees
DOI:
doi:10.5061/dryad.1611
摘要:
of gene trees and detection of phylogenetic incongruence. Recent sequencing projects in Oryza sativa and its wild relatives have positioned rice
Data from: Gene duplication in an African cichlid adaptive radiation
负责人:
关键词:
gene duplication;Cichlids;CNV;African Great Lakes;speciation
DOI:
doi:10.5061/dryad.7vs2c
摘要:
. Comparative sequence analysis of gene duplicates can address the role of positive selection and adaptive evolution by gene duplication, while further study ac
Data from: Gene expression levels are correlated with synonymous codon usage, amino acid composition and gene architecture in the red flour beetle
负责人:
关键词:
translational selection;gene structure;size\/complexity score;Tribolium castaneum;tRNA abundance
DOI:
doi:10.5061/dryad.r0t1q
摘要:
Gene expression levels correlate with multiple aspects of gene sequence and gene structure in phylogenetically diverse taxa sugges

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