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Data from: Targeted gene enrichment and high-throughput sequencing for environmental biomonitoring: a case study using freshwater macroinvertebrates
- 负责人：
- DOI：
- doi:10.5061/dryad.67n7n
- 摘要：
- t using the gene-enrichment method (all genes). Our data indicated primer biases occurred during amplicon metabarcoding with greater than 80% of sequence
Data from: Phylogenomic analyses resolve an ancient trichotomy at the base of Ischyropsalidoidea (Arachnida, Opiliones) despite high levels of gene
- 负责人：
- DOI：
- doi:10.5061/dryad.3mr26
- 摘要：
- Phylogenetic resolution of ancient rapid radiations has remained problematic despite major advances in statistical approaches and DNA sequencing
Data from: Transposon variants and their effects on gene expression in Arabidopsis
- 负责人：
- DOI：
- doi:10.5061/dryad.8674d
- 摘要：
- nearby gene expression, we investigated genome-wide differences in TEs, siRNAs and gene expression among three Arabidopsis thaliana accessions. Both TE sequence
Data from: Geographically-stratified HIV-1 group M pol subtype and circulating recombinant form sequences
- 负责人：
- DOI：
- doi:10.5061/dryad.56j2n
- 摘要：
- molecular epidemiology. Because most HIV-1 sequencing is done for genotypic resistance testing pol gene, we sought to develop a set of geographically-stratified pol
Data from: Shaking the Diptera tree of life: performance analysis of nuclear and mitochondrial sequence data partitions
- 负责人：
- DOI：
- doi:10.5061/dryad.f7m5t
- 摘要：
- conclusions. Theoretical arguments and empirical data suggest a lower phylogenetic utility than equivalent nuclear gene sequences, but there are many examples
Data from: Evolutionary dynamics of the gametologous CTNNB1 gene on the Z and W chromosomes of snakes
- 负责人：
- DOI：
- doi:10.5061/dryad.k6t0s
- 摘要：
- in snakes, partial sequences of the gametologous CTNNB1 gene were analyzed for 12 species belonging to henophid (Cylindrophiidae, Xenopeltidae, and Pythonidae
Data from: Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus
- 负责人：
- 关键词：
- Artocarpus;incomplete lineage sorting;Target Enrichment;phylogenetics;allele phasing;HybSeq;alleles
- DOI：
- doi:10.5061/dryad.r8q72
- 摘要：
- luding heterozygosity in phylogenetic studies and present a novel method for assembling allele sequences from target enriched Illumina sequencing libraries. Methods
Data from: Comparison of gene coexpression profiles and construction of conserved gene networks to find functional modules
- 负责人：
- DOI：
- doi:10.5061/dryad.p15m6
- 摘要：
- Background: Computational approaches toward gene annotation are a formidable challenge, now that many genome sequences have been determined. Each gene
by next-generation sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.1924
- 摘要：
- Gene expression divergence is one of the mechanisms thought to be involved in the emergence of incipient species. Next-generation sequencing has bec
Data from: Complete genome sequences provide a case study for the evaluation of gene-tree thinking
- 负责人：
- DOI：
- doi:10.5061/dryad.7c7q0
- 摘要：
- Complete genome sequences from a genus of Gammaproteobacteria, Shewanella, are used to generate a genome-wide exploration of the gene-tree species
