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Data from: Efficient exploration of the space of reconciled gene trees
负责人:
关键词:
sequence simulation;Cyanobacteria;Gene tree reconciliation
DOI:
doi:10.5061/dryad.pv6df
摘要:
level events. The reconstruction of gene trees based on sequence alone almost always involves choosing between statistically equivalent or weakly
Data from: Genetic distance as an alternative to physical distance for definition of gene units in association studies
负责人:
关键词:
pathway analysis;recombination rate;Gene definition;Gene-set analysis;Recombination map;Homo Sapiens;Genetic distance;genetic map
DOI:
doi:10.5061/dryad.p58hb
摘要:
of analysis. These genes include the coding sequence plus flanking sequences. Polymorphisms in the flanking sequences are of interest because they involve
Data from: Unmapped sequencing reads identify additional candidate genes linked to magnetoreception in rainbow trout
负责人:
关键词:
RNA-seq;Transcriptomics;Oncorhynchus mykiss;gene expression
DOI:
doi:10.5061/dryad.4g048
摘要:
and on non-visual encephalic photoreceptors. Our results demonstrate the utility of assembling unmapped sequencing reads in studies of gene expression and identify
Data from: Recurrent gene deletions and the evolution of adaptive cyanogenesis polymorphisms in white clover (Trifolium repens L.)
负责人:
关键词:
molecular evolution;Trifolium repens (Fabaceae);Angiosperms;Ecological Genetics;Adaptation
DOI:
doi:10.5061/dryad.ks6g0
摘要:
of balancing selection in closest flanking genomic sequences. Instead, we find evidence for variation in the size of the deletions characterizing gene-absence alleles
Data from: Annotation of pseudogenic gene segments by massively parallel sequencing of rearranged lymphocyte receptor loci
负责人:
关键词:
DOI:
doi:10.5061/dryad.t47g3
摘要:
at the D-J and V-DJ junctions further increases diversity. Many of these gene segments are annotated as non-functional owing to defects in their primary sequence
Data from: Evaluating the performance of targeted sequence capture, RNA-Seq, and degenerate-primer PCR cloning for sequencing the largest mammalian
负责人:
关键词:
Genomics\/Proteomics;targeted sequence capture;Transcriptomics;Mammals;olfactory receptor;multigene family
DOI:
doi:10.5061/dryad.179116t
摘要:
. Molecular analyses of these gene families require high-confidence sequences, but the high sequence similarity of the members can create challenges for sequencing
Data from: c-Myc gene sequences and the phylogeny of bats and other eutherian mammals
负责人:
关键词:
DNA sequences;maximum likelihood;eutherian mammals;phylogeny;c-myc gene
DOI:
doi:10.5061/dryad.590
摘要:
The complete protein-coding sequences of the c-myc proto-oncogene were determined for five species of four new orders of eutherian (place
Data from: Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples
负责人:
关键词:
Metazoan;Midori reference
DOI:
doi:10.5061/dryad.2v00t
摘要:
reference dataset available for taxonomic assignments. Here, we retrieved all metazoan mitochondrial gene sequences from GenBank, and then quality filtered
Data from: Targeted sequencing of venom genes from cone snail genomes improves understanding of conotoxin molecular evolution
负责人:
关键词:
venom evolution;Conidae;diversification
DOI:
doi:10.5061/dryad.vk245pd
摘要:
conotoxin gene diversity. Overall, the targeted sequencing technique demonstrated here has the potential to radically increase the pace at which venom gene families

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