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Data from: Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference
负责人:
关键词:
genomics;reference genome;ddRAD;bioinformatics;Galápagos sea lion (Zalophus wollebaeki)
DOI:
doi:10.5061/dryad.q14c1
摘要:
Restriction site-associated DNA sequencing (RAD-seq) provides high-resolution population genomic data at low cost, and has become an importa
Data from: Ecological speciation in sympatric palms: 3. genetic map reveals genomic islands underlying species divergence in Howea
负责人:
关键词:
Howea forsteriana;Howea belmoreana;Sympatry;ddRAD;Genome;genetic map;speciation
DOI:
doi:10.5061/dryad.rh2dq7j
摘要:
genes with functions that are particularly relevant to the speciation scenario for Howea, specifically salt and drought tolerance.
stingrays
负责人:
关键词:
genetic fish;conservation tools;NGS techniques;SNPs;hybridization;Potamotrygon
DOI:
doi:10.5061/dryad.1pq21
摘要:
, using double digest restriction-site associated DNA (ddRAD) reads using 454-Roche technology. A total of 226 774 reads (65.5 Mb) were obtained (mea
Data from: Genomic footprints of adaptation in a cooperatively breeding tropical bird across a vegetation gradient
负责人:
关键词:
isolation by distance;selection;isolation by environment;genome scan;genotype-environment-phenotype associations;Yucatan jay;adaptive genetic variation;Cyanocorax yucatanicus
DOI:
doi:10.5061/dryad.2t6t8
摘要:
restriction site-associated DNA (ddRAD-Seq) to test hypotheses related to IBD and IBE in the Yucatan jay (Cyanocorax yucatanicus), a tropical bird endemic
Data from: Genome-wide markers untangle the green-lizard radiation in the Aegean Sea and support a rare biogeographical pattern
负责人:
关键词:
Overseas dispersal;SNAPP coalescence;Genome wide SNPs;Lacertidae;ddRAD;Lacerta;Pliocene;phylogeography;Pleistocene
DOI:
doi:10.5061/dryad.15d8dq8
摘要:
on east Mediterranean taxa. Location: Aegean Sea, east Mediterranean Taxon: Lacerta lizards Methods: We analysed ddRAD loci (double-digest restriction-site-asso
Data from: Population genomics of the Anthropocene: urbanization is negatively associated with genome-wide variation in white-footed mouse populations
负责人:
关键词:
Conservation Genetics Contemporary Evolution Ecological Genetics Population Genetics - Empirical
DOI:
doi:10.5061/dryad.d48f9
摘要:
ted by ddRAD-Seq. We found that genomewide variation is inversely related to urbanization as measured by percent impervious surface cover, and to a lesser extent
Data from: Detection of environmental and morphological adaptation despite high landscape genetic connectivity in a pest grasshopper (Phaulacridium
负责人:
关键词:
landscape genomics;local adaptation;Population connectivity;2017;Phaulacridium vittatum;pest grasshopper;resistance modelling;RAD sequencing
DOI:
doi:10.5061/dryad.8823vb0
摘要:
ient, we genotyped 185 P. vittatum from 19 sites at 11,408 single nucleotide polymorphisms (SNPs) using ddRAD sequencing. Despite high gene flow across sites (pairwise
Data from: Hybridization drives genetic erosion in sympatric desert fishes of western North America
负责人:
关键词:
Gila elegans;conservation;RADseq;Gila cypha;Gila robusta;hybridization;species boundaries
DOI:
doi:10.5061/dryad.d3q3220
摘要:
) endemic to the Colorado River Basin using ddRAD sequencing of 368 individuals. We first examined the integrity of reproductive isolation while in sympatry
Data from: Ecological speciation in sympatric palms: 4. Demographic analyses support speciation of Howea in the face of high gene flow
负责人:
关键词:
Coalescence;Sympatry;Howea forsteriana;Howea belmoreana;ddRAD;speciation
DOI:
doi:10.5061/dryad.s3t2qn0
摘要:
The idea that populations must be geographically isolated (allopatric) to evolve into separate species has persisted for a long time. It is now clea
Data from: Opening the door to the past: accessing phylogenetic, pathogen, and population data from museum curated bees
负责人:
关键词:
population genetics;ddRAD;Eucera (Peponapis) pruinosa
DOI:
doi:10.5061/dryad.3528sj6
摘要:
, and pathogens. We also generated genome-wide single nucleotide polymorphism (SNP) data from DNA sequencing (ddRADseq) libraries for population structure analyses

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