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Data from: Genetic mapping of horizontal stripes in Lake Victoria cichlid fishes: benefits and pitfalls of using of dense linkage mapping in non-model organisms
- 负责人：
- DOI：
- doi:10.5061/dryad.r1f52
- 摘要：
- , but the development of next-generation sequencing techniques eases this difficulty. Here, we use the ddRAD-seq method to map a color trait with a known adaptive function
Data from: Genotyping-by-sequencing for estimating relatedness in non-model organisms: avoiding the trap of precise bias
- 负责人：
- DOI：
- doi:10.5061/dryad.t8ph5
- 摘要：
- dropout, and missing data scenarios based on an empirical ddRAD dataset, and their true relatedness was compared to that estimated by seven relatedness
Data from: Transpacific coalescent pathways of coconut rhinoceros beetle biotypes: resistance to biological control catalyzes resurgence of an old
- 负责人：
- DOI：
- doi:10.5061/dryad.f4g56
- 摘要：
- invasion pathways and explore correlation between recent invasions and biotypes. From ddRAD sequencing, we generated datasets ranging from 4,000 to 209,000
Data from: Idenitfying hybrids & the genomics of hybridization: mallards & American black ducks of Eastern North America
- 负责人：
- DOI：
- doi:10.5061/dryad.060b8n9
- 摘要：
- ted taxa. Here, we use 3,200 ddRAD-seq loci across 290 mallards, American black ducks, and putative hybrids to establish population structure and estimate
Data from: Unraveling historical introgression and resolving phylogenetic discord within Catostomus (Osteichthys: Catostomidae)
- 负责人：
- DOI：
- doi:10.5061/dryad.8f1j5nd
- 摘要：
- hybrid origin of two species. We also applied na?ve binning to explore potential effects of concatenation. Results: We employed 14,007 loci generated from ddRAD
Data from: Genomic architecture of ecologically divergent body shape in a pair of sympatric crater lake cichlid fishes
- 负责人：
- 关键词：
- limnetic-benthic;QTL;sympatric speciation;ddRADseq;quantitative trait loci;Geometric morphometrics
- DOI：
- doi:10.5061/dryad.2h1c4
- 摘要：
- in young crater lakes. This study identified significant QTL for body shape, using SNPs generated via ddRAD sequencing and geometric morphometric analyses of a cross bet
Data from: Information dropout patterns in restriction site associated DNA phylogenomics and a comparison with multilocus Sanger data in a species
- 负责人：
- DOI：
- doi:10.5061/dryad.474nd
- 摘要：
- A rapid shift from traditional Sanger sequencing-based molecular methods to the phylogenomic approach with large numbers of loci is underway. Amo
Data from: Phylogenomic history of enigmatic pygmy perches: implications for biogeography, taxonomy and conservation
- 负责人：
- DOI：
- doi:10.5061/dryad.3d6g1
- 摘要：
- ially cryptic species diversity. Here, we present the first study of the evolutionary history of pygmy perches based on genome-wide information. Data from 13,991 ddRAD
Data from: Latitudinal divergence in a wide-spread amphibian: contrasting patterns of neutral and adaptive genomic variation
- 负责人：
- DOI：
- doi:10.5061/dryad.fk560dg
- 摘要：
- to northern Sweden. Using ddRAD-seq we obtained 27590 SNPs, and identified differentiation outliers and SNPs associated with growing season length. Populations grouped
Data from: Range-wide population genomics of the Mexican fruit fly: towards development of pathway analysis tools
- 负责人：
- DOI：
- doi:10.5061/dryad.3476709
- 摘要：
- , and its incursions into Texas and California represent major threats to the agricultural systems of those regions. We developed a draft genome assembly for A. ludens
