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Data from: Substantial differences in bias between single-digest and double-digest RAD-seq libraries: a case study
- 负责人：
- DOI：
- doi:10.5061/dryad.qf916
- 摘要：
- e genotyped using a double?digest RAD?seq (ddRAD?seq) protocol. We analysed the resulting Illumina sequencing data and compared the two genotyping
Data from: ddRAD?seq data reveal significant genome?wide population structure and divergent genomic regions that distinguish the mallard and close
- 负责人：
- 关键词：
- sex chromosome;contemporary;population genomics;hybridization;ddRADseq;introgression;speciation
- DOI：
- doi:10.5061/dryad.5gk37t8
- 摘要：
- closely related species based on multi?locus data requires substantial genomic coverage. In this study, we used ddRAD?seq to sample the genomes of five recently diverged
Data from: Applying SNP-derived molecular coancestry estimates to captive breeding programs
- 负责人：
- DOI：
- doi:10.5061/dryad.p380b
- 摘要：
- digest restriction site-associated DNA (ddRAD) sequencing. Our results demonstrated that estimates of allele sharing (AS) between pairs of individuals
Data from: Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Astereae
- 负责人：
- DOI：
- doi:10.5061/dryad.cn74h
- 摘要：
- study analyzes the phylogenetic signal of genomic regions with different inheritance patterns using genome skimming and ddRAD-seq in a species-rich Andean
Data from: A RAD-sequencing approach to genome-wide marker discovery, genotyping, and phylogenetic inference in a diverse radiation of primates
- 负责人：
- DOI：
- doi:10.5061/dryad.85jn3
- 摘要：
- representation method (ddRAD-seq) for identifying and genotyping large numbers of SNP loci for taxa from across the New World monkeys, a diverse radiation of primates tha
Data from: Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus)
- 负责人：
- DOI：
- doi:10.5061/dryad.3dk40
- 摘要：
- Double digest restriction site-associated DNA sequencing (ddRADseq) and target capture sequencing methods are used to explore population
Data from: Application of a dense genetic map for assessment of genomic responses to selection and inbreeding in Heliothis virescens
- 负责人：
- DOI：
- doi:10.5061/dryad.567v8
- 摘要：
- tory colonies have been selected for Bacillus thuringiensis (Bt) resistance. We developed 350-bp double-digest restriction-site associated DNA-sequencing (ddRAD
Data from: Species tree estimation using ddRADseq data from historical specimens confirms the monophyly of highly disjunct species of Chloropyron
- 负责人：
- DOI：
- doi:10.5061/dryad.6j58m7g
- 摘要：
- ciated DNA sequencing (ddRADseq) to resolve intraspecific relationships. We find all species in Chloropyron to be monophyletic, with the inland taxon C. maritimum ssp
Data from: Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology
- 负责人：
- 关键词：
- Eurasian perch SNP development and validation de novo assembly next-generation sequencing population genomics DNA pooling
- DOI：
- doi:10.5061/dryad.s2405
- 摘要：
- sian perch. We expect that our ddRAD sequencing protocol for semiconductor sequencing technology will be useful alternative for currently available RAD protocols.
Data from: RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data
- 负责人：
- DOI：
- doi:10.5061/dryad.ss6c9
- 摘要：
- methods, such as restriction site associated DNA sequencing (RADseq) and sequence capture, are constrained by costs associated with inefficient
