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Data from: A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing
- 负责人：
- Pérez-Porro, Alicia R.
- 关键词：
- Crella elegans de novo assembly transcriptome characterization Mediterranean sponge life cycle stages
- DOI：
- doi:10.5061/dryad.50dc6
- 摘要：
- and transcriptome sequencing in a cost-effective manner. Here we present the first NGS (next-generation sequencing) approach to understanding the life cycle of an enc
Data from: De novo assembly of a tadpole shrimp (Triops newberryi) transcriptome and preliminary differential gene expression analysis
- 负责人：
- DOI：
- doi:10.5061/dryad.t3j7m
- 摘要：
- a gauge in predicting species adaptability. In our study, we used RNA sequencing to characterize the first transcriptome from a naupliar tadpole shrimp
transcriptome of Atlantic mackerel (Scomber scombrus, L)" in Genomic" data-category="" data-cropid="" data-dimen="" data-id="b30e4251-f979-11ea-ae96-0242ac110002"> Data from: "Discovery and characterization of 80 SNPs and 1,624 SSRs in the transcriptome of Atlantic mackerel (Scomber scombrus, L)" in Genomic
- 负责人：
- DOI：
- doi:10.5061/dryad.3rg62
- 摘要：
- This paper reports on SNP discovery in the Atlantic mackerel transcriptome, using next generation sequencing technologies and applying developed
Data from: On the optimal trimming of high-throughput mRNA sequence data
- 负责人：
- DOI：
- doi:10.5061/dryad.7rm34
- 摘要：
- , researchers interested in functional biology and adaptation have used these technologies to sequence mRNA transcriptomes of specific tissues, which in turn ar
Data from: Reference-free transcriptome assembly in non-model animals from next generation sequencing data
- 负责人：
- Cahais, Vincent
- DOI：
- doi:10.5061/dryad.5g32f94b
- 摘要：
- mbling gene-coding sequences out of short reads. This is a complex task owing to gene duplications, genetic polymorphism, alternative splicing and transcription noise. Typical
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
- 负责人：
- 关键词：
- RNA-Seq NGS 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
- DOI：
- doi:10.5061/dryad.50125
- 摘要：
- s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: Transcriptome sequencing and microarray development for the woodrat (Neotoma spp.): custom genetic tools for exploring herbivore ecology
- 负责人：
- 关键词：
- Transcriptomics;Species Interactions;molecular evolution;Neotoma lepida;Mammals;Neotoma bryanti
- DOI：
- doi:10.5061/dryad.25696
- 摘要：
- the de novo transcriptome sequencing, analysis and microarray development for a vertebrate herbivore, the woodrat (Neotoma spp.). This genus is of ecological
-species transcriptome analyses
- 负责人：
- 关键词：
- Mesodinium;Litostomatea;ciliate phylogenomics;mixed-species transcriptomes;sequence contamination
- DOI：
- doi:10.5061/dryad.zw3r22848
- 摘要：
- Transcriptome Sequencing Project, other SRA submissions, and available genome data with our own sequencing efforts to determine the phylogenetic position of Mesodinium
-species transcriptome analyses
- 负责人：
- 关键词：
- Mesodinium;Litostomatea;ciliate phylogenomics;mixed-species transcriptomes;sequence contamination
- DOI：
- doi:10.5061/dryad.n02v6wwsg
- 摘要：
- Transcriptome Sequencing Project, other SRA submissions, and available genome data with our own sequencing efforts to determine the phylogenetic position of Mesodinium
Data from: Immunomics of the koala (Phascolarctos cinereus )
- 负责人：
- DOI：
- doi:10.5061/dryad.sc6bp
- 摘要：
- antigens—and to help combat infectious diseases (e.g., chlamydiosis) that impede ongoing conservation efforts. We used Illumina sequencing of cDNA
