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Data from: 18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species
负责人:
关键词:
DOI:
doi:10.5061/dryad.2p1t8
摘要:
The potential of the 18S rRNA V9 metabarcoding approach for diet assessment was explored using MiSeq paired-end (PE; 2 × 150 bp) technology
Data from: MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical
负责人:
关键词:
resource management;Community Ecology;fish metabarcoding;eDNA;MiSeq
DOI:
doi:10.5061/dryad.54v2q
摘要:
We developed a set of universal PCR primers (MiFish-U/E) for metabarcoding environmental DNA (eDNA) from fishes. Primers were designed using aligned
Data from: Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
负责人:
关键词:
Wasmannia auropunctata;Mixornis gularis;Next-generation sequencing;genotyping;Saccharomyces cervisiae;RAD-seq;methodology
DOI:
doi:10.5061/dryad.34dt1
摘要:
four-base tag to the first index read, which allows duplicate discrimination in aligned data. This approach was validated on the Illumina MiSeq platform, usi
Data from: A broadly applicable COI primer pair and an efficient single?tube amplicon library preparation protocol for metabarcoding
负责人:
关键词:
DOI:
doi:10.5061/dryad.5jq5t36
摘要:
samples were sequenced on a MiSeq platform with no adverse effects compared to commercial Nextera indexing kits. From this run 75% of all included taxa
Data from: Benchmarking DNA metabarcoding for biodiversity-based monitoring and assessment
负责人:
关键词:
biotic indices;Illumina MiSeq;macroinvertebrates;COI barcodes;extracellular DNA;AMBI
DOI:
doi:10.5061/dryad.0sc0s
摘要:
, traditionally and widely used for species identification in coastal and marine ecosystem communities, is tedious and entails limitations. Metabarcoding coupled
Data from: Microbe biogeography tracks water masses in a dynamic oceanic frontal system
负责人:
关键词:
Hydrothermal vents;Oceanic Fronts;microbial ecology;microbial ecology;Oceanic Fronts
DOI:
doi:10.5061/dryad.qh767
摘要:
quencing of the 16S rRNA gene on an Illumina MiSeq platform. Multivariate analyses showed that microbial communities were structured more strongly by depth than by latitude
Data from: Environmental filtering by pH and soil nutrients drives community assembly in fungi at fine spatial scales
负责人:
关键词:
Illumina MiSeq;beta-diversity;ectomycorrhizal fungi (EMF);ectomycorrhizal (ECM) fungi;Generalized dissimilarity modeling (GDM)
DOI:
doi:10.5061/dryad.q0rv9
摘要:
Whether niche processes, like environmental filtering, or neutral processes, like dispersal limitation, are the primary forces driving
by Illumina sequencing
负责人:
关键词:
Hololena adnexa
DOI:
doi:10.5061/dryad.311mm
摘要:
ral hundred predators in a single MiSeq run, reducing the cost per specimen to only a few dollars and requiring a simple and minimal work flow
Data from: Spatial and successional dynamics of microbial biofilm communities in a grassland stream ecosystem
负责人:
关键词:
DNA Barcoding;Microbial Biology;Algae;bacteria;Community Ecology
DOI:
doi:10.5061/dryad.m2r17
摘要:
il 64 days suggesting a balance of the use of autochthonous and allochthonous energy sources until late succession. Bacterial communities (MiSeq analyse
Data from: Fungal community reveals less dispersal limitation and potentially more connected network than that of bacteria in bamboo forest soils
负责人:
关键词:
DOI:
doi:10.5061/dryad.33th5
摘要:
and fungal diversities were assessed by sequencing 16S rRNA and ITS gene amplicons, respectively, with an Illumina MiSeq. Based on structural equation modeling

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