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Data from: Phylogeography of the Trans-Volcanic bunchgrass lizard (Sceloporus bicanthalis) across the highlands of southeastern Mexico
负责人:
关键词:
gene flow;divergence;species delimitation;Coalescence;Biogeography;Sceloporus bicanthalis;Phrynosomatidae;Pleistocene;skyline plot
DOI:
doi:10.5061/dryad.7nv16
摘要:
We quantify the population divergence processes that shaped population genetic structure in the Trans-Volcanic bunchgrass lizard (Sce
Data from: Modeling human population separation history using physically phased genomes
负责人:
关键词:
haplotypes;human genome;Homo Sapiens;human;fosmid;phased
DOI:
doi:10.5061/dryad.r7fs8
摘要:
-time estimation compared with experimentally phased haplotypes. To better interpret patterns of cross-population coalescence, we implemented
Data from: Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing
负责人:
关键词:
Holbrookia;Coalescence;incomplete lineage sorting;Uta;Urosaurus;RADseq;ultraconserved element;Cophosaurus;Uma;ddRADseq;Phrynosoma;Species tree;Callisaurus;SNP;UCE;Phrynosomatidae;Petrosaurus;Sceloporus
DOI:
doi:10.5061/dryad.4vt08
摘要:
for phylogenetic analysis. These methods are typically used to collect data at different evolutionary timescales; sequence capture is primarily used for obtaining conserved
Data from: Multilocus coalescence analyses support a mtDNA-based phylogeographic history for a widespread Palearctic passerine bird, Sitta europaea
负责人:
关键词:
Coalescent Theory;phylogeography;Selection - Natural;Pleistocene;Sitta europaea
DOI:
doi:10.5061/dryad.nf91079h
摘要:
, Europe, and Asia. Neutrality tests showed no evidence of selection on either the mtDNA or nuclear sequences. Most nuclear gene trees, except for Z-linked
Data from: Ancestral gene flow and parallel organellar genome capture result in extreme phylogenomic discord in a lineage of angiosperms
负责人:
关键词:
Recent;Chloroplast capture;Reticulation;Incongruence;Heuchera;Angiosperm;Ancient hybridization;Saxifragales;Saxifragaceae;phylogenomics
DOI:
doi:10.5061/dryad.cd546
摘要:
) data. We analyze these data using multiple concatenation and coalescence strategies. The nuclear phylogeny is consistent with previous
Data from: Hybridization could be a common phenomenon within the highly diverse lizard genus Liolaemus
负责人:
关键词:
gene flow;Coalescence;incomplete lineage sorting;model-based approach;hybridization;lizards
DOI:
doi:10.5061/dryad.fm0g3m5
摘要:
. We included molecular data (12 nuclear and 2 mitochondrial genes) from 127 individuals, and results of a coalescent model-based analysis show that the most li
Data from: Resolving recent plant radiations: power and robustness of genotyping-by-sequencing
负责人:
关键词:
Coalescence;Concatenation;Radiation;Quaternary;genotyping-by-sequencing;Linaria;phylogeny;RAD-seq;speciation
DOI:
doi:10.5061/dryad.mp818
摘要:
may partly explain incongruences between NJst, SVDquartets and concatenated trees. Integration of morphometric and coalescent-based phylogenetic result
Data from: Disentangling the complex evolutionary history of the Western Palearctic blue tits (Cyanistes spp.) – phylogenomic analyses sugges
负责人:
关键词:
Cyanistes teneriffae;Cyanistes cyanus;Colonisation;Radiation;Isolation;Cyanistes caeruleus;Miocene;Coalescence;Pliocene;Holocene;RAD sequencing;Pleistocene
DOI:
doi:10.5061/dryad.67dn4
摘要:
), analysed in coalescence and phylogenetic frameworks. We found (i) that Afrocanarian blue tits are monophyletic and represent four major clades, (ii) tha
Data from: Hybrid asexuality as a primary postzygotic barrier between nascent species: on the interconnection between asexuality, hybridization
负责人:
关键词:
Evolution of Asexuality;phylogeography;hybridization;Coalescence;Balance Hypothesis;speciation
DOI:
doi:10.5061/dryad.7nt8f
摘要:
of speciation and asexuality evolution in European spined loaches (Cobitis). Contemporary species readily hybridize in hybrid zones, but produce infertile males
Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
using marginal likelihood to assess data subset combinability when data subsets have varying levels of phylogenetic discordance due to deep coalescence

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