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), using coalescent-based methods
负责人:
关键词:
species delimitation;Species tree;Euprepiophis perlacea;Coalescence;Gene tree
DOI:
doi:10.5061/dryad.053m3
摘要:
t species sister to Euprepiophis mandarinus. Despite gene tree discrepancy, the coalescent model-based approaches used here demonstrate the taxonomic val
Data from: Worldwide phylogeny of three-spined sticklebacks
负责人:
关键词:
Pleistocene to Holocene.;SNP;Gasterosteus;coalescent;RAD-seq;phylogenomics;Gasterosteus aculeatus
DOI:
doi:10.5061/dryad.2529hr1
摘要:
. Coalescence-based divergence time estimates suggest that divergence among major clades is much more recent than previously estimated.
Data from: Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays
负责人:
关键词:
phylogeography;phylogenetics;Biogeography;Aphelocoma ultramarina;Miocene;Pliocene;speciation;Pleistocene
DOI:
doi:10.5061/dryad.1786
摘要:
the process of gene lineage coalescence, the present approach provides a more biologically realistic framework for dating speciation events, and hence
Data from: Phylogenomics uncovers confidence and conflict in the rapid radiation of Australo-Papuan rodents
负责人:
关键词:
Species tree;branch support;Coalescence;incomplete lineage sorting;Concatenation;exon capture;bootstrap;Murinae
DOI:
doi:10.5061/dryad.9sj4hm8
摘要:
e, we explore this issue by comparing various branch support estimates under both concatenated and coalescent frameworks, in the recent radiation Australo-Papuan
Data from: Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
负责人:
关键词:
Demography;Bayesian;ancient DNA;mutation rate;coalescent simulation;heterochronous sequences
DOI:
doi:10.5061/dryad.1355
摘要:
e exciting are recent developments in coalescence-based Bayesian inference that offer the potential to use temporal information from aDNA and mDNA
Data from: Incomplete lineage sorting in mammalian phylogenomics
负责人:
关键词:
supertree;Coalescence;placental;phylogeny;exon
DOI:
doi:10.5061/dryad.1m3s2
摘要:
and conditions of applicability of ILS-aware methods in phylogenomic analyses of protein coding sequences.
Data from: Demographic inferences using short-read genomic data in an Approximate Bayesian Computation framework: in silico evaluation of power
负责人:
关键词:
DOI:
doi:10.5061/dryad.78k38
摘要:
bottleneck. Overall, this study evaluates the potential and limitations of GBS data in an ABC-coalescence framework and proposes a best-practice approach.
Data from: Influence of gene flow on divergence dating – implications for speciation history of Takydromus grass lizards
负责人:
关键词:
gene flow;Reptiles;population demography;parapatric speciation;Takydromus spp.
DOI:
doi:10.5061/dryad.4p7n5
摘要:
ot be overlooked and may have a great impact on divergence dating. By using multilocus data and incorporating Bayesian coalescence approaches, we provide a mor

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