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Data from: Whole-chloroplast analysis as an approach for fine-tuning the preservation of a highly charismatic but critical
- 负责人：
- DOI：
- doi:10.5061/dryad.6908r
- 摘要：
- ross the chloroplast using shotgun sequencing, bioinformatic extraction of chloroplast DNA and variant detection. Six chloroplast single nucleotide polymorphisms wer
Data from: Graph splitting: a graph-based approach for superfamily-scale phylogenetic tree reconstruction
- 负责人：
- DOI：
- doi:10.5061/dryad.ps0qf4r
- 摘要：
- onary history. Phylogenetic analysis of the early evolution of protein superfamilies is a key challenge because existing phylogenetic methods show poor performance when protein
Data from: CHIIMP: an automated high-throughput microsatellite genotyping approach reveals greater allelic diversity in wild chimpanzees
- 负责人：
- DOI：
- doi:10.5061/dryad.59j3974
- 摘要：
- t microsatellite loci as a reference, we designed a bioinformatics platform that converts raw MiSeq reads into locus-specific files and automatically calls alleles aft
Data from: High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quanti
- 负责人：
- DOI：
- doi:10.5061/dryad.18tg7
- 摘要：
- to microsatellite sequences, allowing unambiguous allele identification and enabling automation of the genotyping process through bioinformatics. In addition, the massi
Data from: ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
- 负责人：
- DOI：
- doi:10.5061/dryad.v15v0
- 摘要：
- file formats than other softwares, including newick, nexus, NHX, phylip and jplace formats, and support visualization of phylo, multiphylo, phylo4, phylo4d
Data from: How “simple” methodological decisions affect interpretation of population structure based on reduced representation library DNA sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.4vr8kp3
- 摘要：
- l, we show that apparently simple decisions about library quality and bioinformatics parameters can have potentially important impacts on the interpretation
Data from: Insights into the roles of CMK-1 and OGT-1 in interstimulus interval-dependent habituation in Caenorhabditis elegans
- 负责人：
- Rankin, Catharine
- DOI：
- doi:10.5061/dryad.qg7kv6c
- 摘要：
- characteristic of habituation remain unknown. In this article we use behavioral neurogenetic and bioinformatic analyses in the nematode Caenorhabiditis elegans
Data from: Genomic characterization of sex-identification markers in Sebastes carnatus and Sebastes chrysomelas rockfishes
- 负责人：
- DOI：
- doi:10.5061/dryad.3c8s8
- 摘要：
- differences were also detected between sex-specific and autosomal loci. A PCR-RFLP assay validated the bioinformatic results and correctly identified sex of five
Data from: Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
- 负责人：
- DOI：
- doi:10.5061/dryad.q760h
- 摘要：
- e developed and optimized RNA-Seq library chemistry as well as bioinformatics and biostatistical methods for whole transcriptome profiling from FFPE ti
Data from: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra
- 负责人：
- DOI：
- doi:10.5061/dryad.4bb5849
- 摘要：
- ve for organisms with large genomes. Moreover, the repetitive nature of large genomes often represents a challenge in bioinformatic and downstream analyses. Her
