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Data from: Sweepstake evolution revealed by population-genetic analysis of copy-number alterations in single genomes of breast cancer
- 负责人：
- DOI：
- doi:10.5061/dryad.71jp0
- 摘要：
- . Phylogenetic tree analysis revealed genetically distinct populations, each consisting of homogeneous cells. Bioinformatics methods based on population genetics should be furt
Data from: The new bioinformatics: integrating ecological data from the gene to the biosphere
- 负责人：
- DOI：
- doi:10.5061/dryad.qb0d6
- 摘要：
- Bioinformatics, the application of computational tools to the management and analysis of biological data, has stimulated rapid research advances
Data from: AftrRAD: a pipeline for accurate and efficient de novo assembly of RADseq data
- 负责人：
- DOI：
- doi:10.5061/dryad.sn034
- 摘要：
- of novel bioinformatic tools that aid in the generation and analysis of these data. Here, we report the availability of AftrRAD, a bioinformatic pipeline
Data from: Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection
- 负责人：
- 关键词：
- Rice Genomic variation High throughput sequencing Copy Number Variation Marker assisted selection
- DOI：
- doi:10.5061/dryad.8hg32
- 摘要：
- on or genomic selection. In this work we present sequencing and bioinformatics analyses of 104 rice varieties belonging to the major subspecies of Oryza sati
Data from: Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment
- 负责人：
- DOI：
- doi:10.5061/dryad.3t3n7
- 摘要：
- ing), technological processing (sequencing error ?, library normalization) and bioinformatic workflow (de novo vs. mapping assembly, reference genome quality) impact
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
- 负责人：
- DOI：
- doi:10.5061/dryad.m6t4j
- 摘要：
- Predicting functions of proteins and alternatively spliced isoforms encoded in a genome is one of the important applications of bioinformatics
Data from: ExcaliBAR: a simple and fast software utility to calculate intra- and interspecific distances from DNA barcodes
- 负责人：
- DOI：
- doi:10.5061/dryad.r458n
- 摘要：
- oming available, requiring ever more efficient bioinformatic environments and software algorithms for analysis. We here present ExcaliBAR (Extracti
Data from: Extending RAD tag analysis to microbial ecology: a comparison between multi locus sequence typing (MLST) and 2b-RAD to investi
- 负责人：
- DOI：
- doi:10.5061/dryad.m1bm5
- 摘要：
- whole-genome sequencing, which also remains impractical for large population samples due to the cost of individual library preparation and bioinformatics. More traditional
Data from: Public sharing of research datasets: a pilot study of associations
- 负责人：
- DOI：
- doi:10.5061/dryad.3td2f
- 摘要：
- s will inform our ongoing larger analysis, and hopefully contribute to the development of more effective data sharing initiatives. **Earlier version present
Data from: Marker development for phylogenomics: the case of Orobanchaceae, a plant family with contrasting nutritional modes
- 负责人：
- DOI：
- doi:10.5061/dryad.7b86c
- 摘要：
- ity of reference data as well as on biological features of the study system, (semi-)automated identification of suitable markers will require specific bioinformatic
