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Data from: Phylogenetic relationship among horseshoe crab species: effect of substitution models on phylogenetic analyses
负责人:
关键词:
RELL;Tachypleus gigas;substitution model;Tachypleus tridentatus;molecular phylogenetics;Carcinoscorpius rotundicauda;Limulus polyphemus
DOI:
doi:10.5061/dryad.551
摘要:
species were used in a phylogenetic analysis with various substitution models. All three genes yield the same tree topology, with Tachypleus-gigas
Data from: A new hierarchy of phylogenetic models consistent with heterogeneous substitution rates
负责人:
关键词:
ModelTest;Lie Markov models;model selection;phylogenetics;multiplicative closure
DOI:
doi:10.5061/dryad.461g6
摘要:
When the process underlying DNA substitutions varies across evolutionary history, some standard Markov models underlying phylogenetic methods ar
Data from: Interpreting the evolutionary regression: the interplay between observational and biological errors in phylogenetic comparative studies
负责人:
关键词:
Reduced major-axis regression;Major-axis regression;phylogenetic comparative methods;Structural equation;Phylogenetic inertia;Allometry;Measurement error;Adaptation
DOI:
doi:10.5061/dryad.r76cm3bn
摘要:
onship, and such deviations commonly show a pattern of phylogenetic correlations indicating that they have biological causes. We discuss the origins and effects
Data from: Phylogenetic ANOVA: group-clade aggregation, biological challenges, and a refined permutation procedure
负责人:
关键词:
Macroevolution;Morphological Evolution;Plethodon;multivariate data;phylogenetic comparative methods
DOI:
doi:10.5061/dryad.2s8d0f9
摘要:
ropriate statistical properties for both phylogenetic ANOVA and regression models, and for univariate and multivariate datasets. For ANOVA, we find that RRPP exhibits higher
Data from: Testing the link between phenotypic evolution and speciation: an integrated paleontological and phylogenetic analysis
负责人:
关键词:
fossil record;Poseidonamicus;punctuated equilibrium;Macroevolution;Cenozoic;Holocene;Ostracoda;speciation
DOI:
doi:10.5061/dryad.6s146
摘要:
wise accruing in established lineages. Paleontological tests of this model have generally lacked an adequate phylogenetic and modeling framework, wherea
Data from: A new Bayesian method for fitting evolutionary models to comparative data with intraspecific variation
负责人:
关键词:
Morphological Evolution;phylogenetics;Cyprinidae;Models\/Simulations
DOI:
doi:10.5061/dryad.7fv08k72
摘要:
it takes phenotypic values from individuals and a phylogenetic tree as input, and then samples species means and variances, along with the parameters
Data from: Phylogenetic eigenvectors and non-stationarity in the evolution of theropod dinosaur skulls
负责人:
关键词:
Comparative Methods;Mesozoic;dinosaurs;phylogenetic eigenvector regression;non-stationarity;Theropoda;Morphometrics
DOI:
doi:10.5061/dryad.1c1d4
摘要:
) models increasing the number of phylogenetic eigenvectors against the accumulated eigenvalues. The PSR curve is linear under a stationary model
Data from: Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach
负责人:
关键词:
anagenetic;Dysploidy;polyploidy;Bayes factors;ChromoSSE;phylogenetic models;whole genome duplication;chromosome evolution;reversible-jump Markov chain Monte Carlo;chromosome speciation;cladogenetic
DOI:
doi:10.5061/dryad.46m4b
摘要:
ChromoSSE) that incorporate both anagenetic and cladogenetic change. The ChromoSSE models allow us to determine the mode of chromosome number evoluti
Data from: ModelOMatic: fast and automated comparison between RY, nucleotide, amino acid, and codon substitution models
负责人:
关键词:
model selection;phylogenetics;substitution models;AIC
DOI:
doi:10.5061/dryad.gq0pb
摘要:
Molecular phylogenetics is a powerful tool for inferring both the process and pattern of evolution from genomic sequence data. Statistic
Data from: Improving spatial predictions of taxonomic, functional and phylogenetic diversity
负责人:
关键词:
Mountain grassland;ecological assembly rules;S?rensen dissimilarity index;stacked species distribution models;plant traits;vegetative height;leaf area;macroecological models;similarity effect;Assemblage modelling
DOI:
doi:10.5061/dryad.cn921
摘要:
1. In this study, we compare two community modelling approaches to determine their ability to predict the taxonomic, functional and phylogenetic

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