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Data from: The coalescent in boundary-limited range expansions
负责人:
关键词:
Genetic Variation;Coalescent Theory;genetic drift;gene flow;population genetics
DOI:
doi:10.5061/dryad.mk6g1
摘要:
, as driven for instance by global warming. Here, we develop a coalescent model to study the genetic impact of such "boundary-limited" range expansions
Data from: Evidence for climate-driven diversification? A caution for interpreting ABC inferences of simultaneous historical events
负责人:
关键词:
Coalescent Theory;phylogeography;Biogeography;Models\/Simulations;speciation
DOI:
doi:10.5061/dryad.5s07m
摘要:
in prior distributions, and our simulations reveal low power of the method to detect random variation in divergence times and bias toward supporting clustered divergences
Data from: Species delimitation with gene flow
负责人:
关键词:
Scincella;Multispecies coalescent;Sarracenia;approximate likelihoods;isolation-with-migration;Homo Sapiens;genealogical divergence index;coalescent simulations
DOI:
doi:10.5061/dryad.t8016
摘要:
to identify evolutionarily independent lineages (i.e., to delimit species) using genetic data have typically adopted multispecies coalescent approaches tha
Data from: Detecting evolutionarily significant units above the species level using the Generalized Mixed Yule Coalescent method
负责人:
关键词:
clade-dependent;rate shift;phylogenetic clustering;Birth-death;Simulation;diversification;clade-independent;relative extinction rate
DOI:
doi:10.5061/dryad.3rt26
摘要:
models, as long as simulations are used to evaluate these alternatives, but not against others. The differences between clade-dependent and cla
Data from: Genetic estimates of population age in the water flea, Daphnia magna
负责人:
关键词:
microsatellites;Colonization;metapopulation;Population Expansion;mismatch distribution;Daphnia magna
DOI:
doi:10.5061/dryad.0dn7s
摘要:
ted from multilocus microsatellite datasets to estimate population ages in data generated through coalescent simulations and in samples from populations
Data from: Rarity and incomplete sampling in DNA-based species delimitation
负责人:
关键词:
effective population size;Coleoptera;Scarabaeidae;singletons;Sericini
DOI:
doi:10.5061/dryad.h6q11
摘要:
for the GMYC method in particular under variable NeNe. This effect was less pronounced for methods of species delimitation not based on coalescent models.
Data from: Reticulate evolution within a spruce (Picea) species complex revealed by population genomic analysis
负责人:
关键词:
Picea likiangensis;population genomics;during the Pleistocene glacial cycles and the late Pliocene;introgression;Pliocene;Coalescent analyses;Picea;Genetic divergence;reticulate evolution;Pleistocene
DOI:
doi:10.5061/dryad.gb6c3b0
摘要:
of the four taxa. Coalescent simulations, for each pair of taxa and for all taxa taken together, rejected several tree-like divergence models and supported instea
Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
负责人:
关键词:
Robinson-Foulds;false negative;statistical consistency;maximum likelihood;Bayesian;phylogenetics;false positive
DOI:
doi:10.5061/dryad.65tn4
摘要:
employing coalescent times typically performed better using Bayesian gene trees, with MP-EST, STAR, STEAC, and STELLS outperforming STEM under most conditions
Data from: Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
负责人:
关键词:
America;Homo Sapiens;ancient DNA;BEAST;Holocene
DOI:
doi:10.5061/dryad.23cg1
摘要:
extinction rate. To investigate this further, we applied a novel principal components multiple logistic regression test to Bayesian serial coalescent simulations

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