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Data from: Coalescent versus concatenation methods and the placement of Amborella as sister to water lilies
- 负责人:
- DOI:
- doi:10.5061/dryad.qb251
- 摘要:
- e topologically identical except with respect to the degree of deep coalescence and branch lengths. Our results collectively suggest that the Amborella alon
Data from: Phylogenomics of Lophotrochozoa with consideration of systematic error
- 负责人:
- DOI:
- doi:10.5061/dryad.30k4v
- 摘要:
- strict screening for paralogy using a tree-based approach. In order to reduce possible sources of systematic error, we calculated branch-length
Data from: Testing hypotheses of chaetognath origins: long branches revealed by 18S ribosomal DNA
- 负责人:
- DOI:
- doi:10.5061/dryad.723
- 摘要:
- and winning-sites analyses were employed to discriminate among competing hypotheses. The possibility of long-branch attraction accounting for the ch
Data from: Who let the CAT out of the bag? accurately dealing with substitutional heterogeneity in phylogenomic analyses
- 负责人:
- DOI:
- doi:10.5061/dryad.85b2m
- 摘要:
- of other models because they purportedly suppress long-branch attraction (LBA). These models are two of the most commonly used models in phylogenomics
Data from: Deep mitochondrial origin outside the sampled alphaproteobacteria
- 负责人:
- DOI:
- doi:10.5061/dryad.068d0d0
- 摘要:
- l Alphaproteobacteria. Subsequent phylogenomic analyses that specifically address long branch attraction and compositional bias artefacts suggest that mitochondria di
Data from: Graph splitting: a graph-based approach for superfamily-scale phylogenetic tree reconstruction
- 负责人:
- DOI:
- doi:10.5061/dryad.ps0qf4r
- 摘要:
- tes, and long-branch attraction when sequences are substantially diverged. Its application to an empirical dataset of the triosephosphate isomerase (TIM)-barrel superfamily
Data from: The Strepsiptera Problem: Phylogeny of the Holometabolous Insect Orders Inferred from 18S and 28S Ribosomal DNA Sequences and Morphology
- 负责人:
- DOI:
- doi:10.5061/dryad.772
- 摘要:
- . We reject the notion that the monophyly of Halteria is due to long branch attraction because Strepsiptera and Diptera do not have the longest branches
Data from: Nearly complete rRNA genes from 371 Animalia: updated structure-based alignment and phylogenetic analysis
- 负责人:
- Mallatt, Jon M.
- DOI:
- doi:10.5061/dryad.1v62kr3q
- 摘要:
- roximately uncertain (AU) test refuted the monophyly of Mollusca and of Chordata, probably due to long-branch attraction of the highly divergent cephalopod
Data from: The identification of the closest living relative(s) of tetrapods: phylogenomic lessons for resolving short ancient internodes
- 负责人:
- DOI:
- doi:10.5061/dryad.gd74v
- 摘要:
- the most important sources of systematic error, namely long-branch attraction (LBA), compositional heterogeneity and distribution of missing data
Data from: An R package and online resource for macroevolutionary studies using the ray-finned fish tree of life
- 负责人:
- DOI:
- doi:10.5061/dryad.6vg974n
- 摘要:
- ee examples of advanced usage through the R package. First, we test for the presence of long branch attraction artifacts across the fish tree of life. The se