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Data from: Is the tree of life the best metaphor, model or heuristic for phylogenetics?
负责人:
关键词:
affinity network;genealogical network;Modeling;phylogenetic network
DOI:
doi:10.5061/dryad.qh53c
摘要:
as a metaphor is actually pre-dated by the network as a phylogenetic metaphor, and that many of the current debates in phylogenetics are not new and actually dat
Data from: Phylogenetic comparative methods on phylogenetic networks with reticulations
负责人:
关键词:
phylogenetic comparative methods;PhyloNetworks;Xiphophorus;phylogenetic networks;Transgressive Evolution;heterosis
DOI:
doi:10.5061/dryad.nt2g6
摘要:
the phylogenetic variance matrix of a trait on a network, in only one preorder traversal of the network. We then extend the standard PCM tools to this new framework
Data from: Components of phylogenetic signal in antagonistic and mutualistic networks
负责人:
关键词:
Phylogeny Community: structure Ecology: community Food web
DOI:
doi:10.5061/dryad.5m0m5
摘要:
fy the strength of phylogenetic signal across network types, species sets, and components of network structure. We find contrasting differences across such groups
Data from: How much information is needed to infer reticulate evolutionary histories?
负责人:
关键词:
reticulate evolution;phylogenetic network;network reconstruction;evolutionary tree
DOI:
doi:10.5061/dryad.f6n8s
摘要:
Phylogenetic networks are a generalization of evolutionary trees and are an important tool for analyzing reticulate evolutionary histories. Recent
Data from: Phylogenetic signal in module composition and species connectivity in compartmentalized host-parasite networks
负责人:
关键词:
Ecology: evolutionary;mammal;Mammalia;Insecta;Siphonaptera;Rodentia;Soricomorpha;phylogeny;Lagomorpha;insect;Erinaceomorpha
DOI:
doi:10.5061/dryad.2q4p67m9
摘要:
within modules and whether a phylogenetic signal is detectable in the within- and among module connectivity of species using 27 mammal-flea networks from
Data from: The contribution of rare species to community phylogenetic diversity across a global network of forest plots
负责人:
关键词:
Ecology: community;Community: structure;phylogenetics;biodiversity
DOI:
doi:10.5061/dryad.p4n8rg64
摘要:
ons by developing a novel method that integrates species rank abundance distributions with phylogenetic trees and trend analyses to examine the relative contributi
Data from: Biogeographical network analysis of cretaceous terrestrial tetrapods: a phylogeny-based approach
负责人:
Kubo, Tai
关键词:
phylogeny Network analysis biogeography network index simulation terrestrial tetrapods
DOI:
doi:10.5061/dryad.3q11m8g
摘要:
phylogenetic information is proposed in this study, which increases the number of edges in the network of fossil vertebrates and enables the application of var
Data from: Reticulate evolutionary history and extensive introgression in mosquito species revealed by phylogenetic network analysis
负责人:
关键词:
Bioinfomatics/Phyloinfomatics Genomics/Proteomics Hybridization Insects Molecular Evolution Phylogenetic Theory and Methods
DOI:
doi:10.5061/dryad.tn47c
摘要:
d in the study, phylogenetic networks provide a more natural model to capture reticulate evolutionary histories. In this work, we reanalyse the Anopheles data usi
Data from: Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)
负责人:
关键词:
gene flow;polyploidy;cytonuclear discordance;Rosaceae;Lachemilla;hybridization;species trees;introgression;phylogenetic networks
DOI:
doi:10.5061/dryad.vj2s888
摘要:
for phylogenetic reconstruction. Here, we use sequence capture data and multiple species tree and species network approaches to resolve the backbone phylogeny of the Neotropic
Data from: Graph splitting: a graph-based approach for superfamily-scale phylogenetic tree reconstruction
负责人:
关键词:
early evolution;TIM-barrel superfamily;Network analysis;Phylogenetic method;bioinformatics
DOI:
doi:10.5061/dryad.ps0qf4r
摘要:
onary history. Phylogenetic analysis of the early evolution of protein superfamilies is a key challenge because existing phylogenetic methods show poor performance when protein

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