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Data from: TLR and IMD signaling pathways from Caligus rogercresseyi (Crustacea: Copepoda): in silico gene expression and SNPs discovery
- 负责人：
- DOI：
- doi:10.5061/dryad.sm32j
- 摘要：
- obtained for three developmental stages of C. rogercresseyi were used to evaluate in silico the expression patterns and presence of SNPs variants in gene
quencing, characterization and overview of the gene expression along three life cycle stages
- 负责人：
- Pérez-Porro, Alicia R.
- 关键词：
- Crella elegans de novo assembly transcriptome characterization Mediterranean sponge life cycle stages
- DOI：
- doi:10.5061/dryad.50dc6
- 摘要：
- of selected genes in the three life cycle stages to explore the potential of RNA-seq for improving knowledge on functional processes along the sponge life cycle.
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
- 负责人：
- 关键词：
- NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
- DOI：
- doi:10.5061/dryad.50125
- 摘要：
- s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: Attack of the PCR clones: rates of clonality have little effect on RAD-seq genotype calls
- 负责人：
- DOI：
- doi:10.5061/dryad.3mq4631
- 摘要：
- clones, but 95% of RAD-tags had five or fewer clones. Relatively few genotypes changed once clones were removed (5-10%), and the vast majority of these cha
Data from: Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus
- 负责人：
- DOI：
- doi:10.5061/dryad.d6508
- 摘要：
- for fat yield, protein percentage and yield, lactose percentage and yield, milk volume, and the proportions of numerous milk fatty acids. We then used mammary
Data from: A framework phylogeny of the American oak clade based on sequenced RAD data
- 负责人：
- DOI：
- doi:10.5061/dryad.ts2hj
- 摘要：
- confidence to one or more expressed sequence tags in NCBI Genbank. A concatenated matrix of the loci that BLAST to at least one EST sequence provides app
Data from: Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
- 负责人：
- DOI：
- doi:10.5061/dryad.q760h
- 摘要：
- e developed and optimized RNA-Seq library chemistry as well as bioinformatics and biostatistical methods for whole transcriptome profiling from FFPE tissue
Data from: A genes eye view of ontogeny: De novo assembly and profiling of the Gryllus rubens transcriptome
- 负责人：
- DOI：
- doi:10.5061/dryad.7n10n
- 摘要：
- e we developed a de novo transcriptome from pooled RNA-seq Illumina data spanning 7 stages in the life cycle of Gryllus rubens. Approximately 705 Mbp of data
Data from: De novo assembly and characterization of the transcriptome of the parasitic weed Cuscuta pentagona identifies genes associated with plant
- 负责人：
- DOI：
- doi:10.5061/dryad.7fr20
- 摘要：
- is largely unknown. In order to investigate the process of parasitism, RNAs from different stages, i.e. seed, seedling, vegetative strand, prehaustoria
Data from: A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals
- 负责人：
- DOI：
- doi:10.5061/dryad.p760b
- 摘要：
- and genomewide transcripts and therefore can be used to assess the transcriptional status of an individual, and to infer a high percentage of the genome. Howeve
