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Data from: A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering
负责人:
关键词:
Nuclear Genes;k-means clustering;Target Enrichment;HybSeq;Machine Learning;Angiosperms;phylogenomics
DOI:
doi:10.5061/dryad.s3h9r6j
摘要:
of orthologous loci for probe design. In plants, identifying orthologous loci has proven difficult due to a large number of whole-genome duplication events, es
Data from: High-throughput molecular identification of fish eggs using multiplex suspension bead arrays
负责人:
Gleason, Lani U
关键词:
fish egg identification DNA Barcoding suspension bead arrays Fish
DOI:
doi:10.5061/dryad.8p425
摘要:
by mitochondrial DNA (mtDNA) sequences (e.g., via “DNA barcoding”). By taking advantage of a DNA barcode database, we have developed oligonucleotide probes for 23 marine fish species
Data from: Super-resolution imaging of a 2.5 kb non-repetitive DNA in situ in the nuclear genome using molecular beacon probes
负责人:
关键词:
fluorescence in situ hybridization;stochastic optical reconstruction?microscopy;super-resolution imaging;molecular beacons;non-repetitive DNA
DOI:
doi:10.5061/dryad.126k9
摘要:
3D-STORM and 29-34 individual MB probes, we observed 3D fine-scale nanostructures of 2.5 kb integrated or endogenous unique DNA in situ in the human
Data from: 60 specific eDNA qPCR assays to detect invasive, threatened and exploited freshwater vertebrates and invertebrates in Eastern Canada
负责人:
关键词:
DOI:
doi:10.5061/dryad.12jm63xtw
摘要:
sment and monitoring of freshwater metazoans. Because eDNA sampling and analysis is non-invasive, it improves the detection of threatened, invasive and exploited species
Data from: Evaluating hybridization capture with RAD probes as a tool for museum genomics with historical bird specimens
负责人:
关键词:
sequence capture;Anthropocene;hyRAD;RADseq;ancient DNA;Syma torotoro;museum genomics
DOI:
doi:10.5061/dryad.r7q86
摘要:
-associated DNA probes (hyRAD) is a recently developed method for population genomics with museum specimens. The hyRAD method employs fragments pro
Data from: Efficient in situ barcode sequencing using padlock probe-based BaristaSeq
负责人:
关键词:
in situ sequencing
DOI:
doi:10.5061/dryad.5dd92
摘要:
Cellular DNA/RNA tags (barcodes) allow for multiplexed cell lineage tracing and neuronal projection mapping with cellular resolution. Conventional
Data from: HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA
负责人:
关键词:
anthropogenic perturbations;subfossils;time series.;genetic diversity;Abies alba;exome reduction;population genomics;ancient DNA;Holocene;hybridization capture;RAD sequencing
DOI:
doi:10.5061/dryad.m94f4
摘要:
is however limited to DNA of relatively high molecular weight. During the last year, several methods exploiting hybridization capture using probes based
Data from: Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus)
负责人:
关键词:
Jasus edwardsii;variant-calling file;probe sequences;Sagmariasus verreauxi;probes sequences
DOI:
doi:10.5061/dryad.3dk40
摘要:
h methods to generate high quality sequencing data for population genomic studies of all marine lobster species from the genus Jasus. We designed probes based
Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics
负责人:
关键词:
DNA probes long range PCR MiSeq next generation sequencing plastomes whole chloroplast sequencing
DOI:
doi:10.5061/dryad.t6b05
摘要:
applicable at deep multiplexed levels. The protocol uses cheap in-house species-specific probes developed via long range PCR of the entire chloro
Data from: Karyotype analysis of Panax ginseng C.A. Meyer, 1843 (Araliaceae) based on rDNA loci and DAPI band distribution
负责人:
关键词:
DAPI band;45S rDNA;5S rDNA;Fish;Panax ginseng;Araliaceae
DOI:
doi:10.5061/dryad.q1cb1
摘要:
, 1843 were conducted using 5S and 45S rDNA probes. The somatic chromosome complement was 2n=48 with lengths from 3.3 ?m to 6.3 ?m. The karyotype

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