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Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
- 负责人：
- 关键词：
- NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
- DOI：
- doi:10.5061/dryad.50125
- 摘要：
- s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: Highly divergent 16S rRNA sequences in ribosomal operons of Scytonema hyalinum (Cyanobacteria)
- 负责人：
- DOI：
- doi:10.5061/dryad.6s386
- 摘要：
- A highly divergent 16S rRNA gene was found in one of the five ribosomal operons present in a species complex currently circumscribed as Scytonema
Data from: Morphological and molecular characterization within 26 strains of the genus Cylindrospermum (Nostocaceae, Cyanobacteria), with descriptions of three new species
- 负责人：
- DOI：
- doi:10.5061/dryad.50pg2
- 摘要：
- microscopically as well as phylogenetically using sequence data for the 16S rRNA gene and the 16S-23S ITS region. Phylogenetic analysis of the 16S rRNA revealed
Data from: COI is better than 16S rRNA for DNA barcoding Asiatic salamanders (Amphibia: Caudata: Hynobiidae)
- 负责人：
- Xia, Yun
- DOI：
- doi:10.5061/dryad.p4r84
- 摘要：
- to be highly variable in amphibians, sequencing is often challenging. Consequently, another mtDNA gene, 16S rRNA gene, is often advocated for amphibian barcoding
Data from: Molecular evidence shows low species diversity of coral-associated hydroids in Acropora corals
- 负责人：
- DOI：
- doi:10.5061/dryad.g0b20
- 摘要：
- hosts. Three molecular markers, including mitochondrial 16S and nuclear 28S ribosomal genes, and internal transcribed spacer (ITS), were utilized
Data from: Phylogenetic relatedness determined between antibiotic resistance and 16S rRNA genes in actinobacteria
- 负责人：
- DOI：
- doi:10.5061/dryad.td742
- 摘要：
- by 16S rRNA gene, for presence of erm and ABC transporter resistance genes and antibiotic production. An analogous analysis was performed in silico with 246 and 31
Data from: Rapid species-level identification of vaginal and oral lactobacilli using MALDI-TOF MS analysis and 16S rDNA sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.78vs2
- 摘要：
- to 16S rDNA analysis. Results: Both methods were used to analyze 77 vaginal and 21 oral Lactobacillus isolates. The concordance of both methods was at 96% with five
Data from: A second species of the family Allophrynidae (Amphibia: Anura)
- 负责人：
- 关键词：
- Allophryne resplendens;Anura;Allophryne;systematics;Allophrynidae;taxonomy;phylogenetics;Amphibia
- DOI：
- doi:10.5061/dryad.2kp7q7vb
- 摘要：
- autapomorphies for 761 base pairs (bp) of the mitochondrial gene 16S and 16 for 923 bp of 12S. Maximum parsimony analysis of the mitochondrial gene 12S
Data from: Bacterial characterization of Beijing drinking water by flow cytometry and MiSeq sequencing of the 16S rRNA gene
- 负责人：
- DOI：
- doi:10.5061/dryad.55nb0
- 摘要：
- Flow cytometry (FCM) and 16S rRNA gene sequencing data are commonly used to monitor and characterize microbial differences
Data from: Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias
- 负责人：
- DOI：
- doi:10.5061/dryad.dn45c
- 摘要：
- sequence divergence to resolve species. We used in silico PCR to compare the taxonomic coverage and resolution of newly designed insect metabarcodes (targeting 16S
