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Data from: Phylogenetic relatedness determined between antibiotic resistance and 16S rRNA genes in actinobacteria
负责人:
关键词:
Actinobacteria;resistance genes;phylogeny;Actinobacteria;sequenced genome database;16S rRNA diversity;thin layer chromatography
DOI:
doi:10.5061/dryad.td742
摘要:
, distances of erm gene sequences were significantly correlated to phylogenetic distances based on 16S rRNA genes, while ABC transporter gene distances wer
Data from: Bacterial characterization of Beijing drinking water by flow cytometry and MiSeq sequencing of the 16S rRNA gene
负责人:
关键词:
Flow cytometry;MiSeq sequencing;Opportunistic pathogenic bacteria;Drinking water quality monitoring;Fluorescence fingerprints
DOI:
doi:10.5061/dryad.55nb0
摘要:
Flow cytometry (FCM) and 16S rRNA gene sequencing data are commonly used to monitor and characterize microbial differenc
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
负责人:
关键词:
NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
DOI:
doi:10.5061/dryad.50125
摘要:
s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: COI is better than 16S rRNA for DNA barcoding Asiatic salamanders (Amphibia: Caudata: Hynobiidae)
负责人:
Xia, Yun
关键词:
Amphibians DNA Barcoding species identification cryptic species
DOI:
doi:10.5061/dryad.p4r84
摘要:
to be highly variable in amphibians, sequencing is often challenging. Consequently, another mtDNA gene, 16S rRNA gene, is often advocated for amphibian barcoding
Data from: The complete sequence of the mitochondrial genome of Butomus umbellatus - a member of an early branching lineage of monocotyledons
负责人:
关键词:
monocots;plant mitochondria;Genome sequencing;Butomus umbellatus
DOI:
doi:10.5061/dryad.42gc4
摘要:
nome of Butomus umbellatus (Butomaceae) based on next-generation sequencing data. The genome was assembled into a circular molecule, 450,826 bp in length. Coding sequences
Data from: A genetic discontinuity in root-nodulating bacteria of cultivated pea in the Indian trans-Himalayas
负责人:
关键词:
Evolutionary relationships;Rhizobium leguminosarum symbiovar viciae;Biogeography;Rhizobium leguminosarum biovar viciae;Indian trans-Himalayas;Rhizobium leguminosarum bv. viciae
DOI:
doi:10.5061/dryad.21rt0fp0
摘要:
of the trans-Himalayan valleys of Lahaul and Spiti in the state of Himachal Pradesh of India were studied using 16S rRNA gene PCR-RFLP, ERIC-PCR, sequencing
Data from: Kinship, inbreeding, and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise
负责人:
关键词:
microsatellites;fecal microbiota;Gopher tortoise;16S rRNA sequencing;Gopherus polyphemus;microbial diversity
DOI:
doi:10.5061/dryad.54bm8
摘要:
in an obligate herbivorous reptile. Using multiplexed 16S rRNA gene sequencing, we characterized the faecal microbial community of a population of gopher tortoise
g to clinical criteria and toxin gene load
负责人:
关键词:
DOI:
doi:10.5061/dryad.30kk201
摘要:
ng 16S rRNA gene sequencing. Chao1 index for alpha diversity were calculated and principal coordinate analysis was performed for beta diversity using Quantitative Insights int
Data from: Home-made cost effective preservation buffer is a better alternative to commercial preservation methods for microbiome research
负责人:
关键词:
swabs;fecal samples;freezing;Next-generation sequencing;sample preservation;Ovis aries sp.;buffer;Gut microbiome;sheep
DOI:
doi:10.5061/dryad.5rk06
摘要:
to 16S rRNA gene high-throughput sequencing to determine bacterial communities. Results revealed that the proportions of operational taxonomic units (OTUs) belonging

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